SwissProt blast output of UN05600
BLASTX 7.6.2
Query= UN05600 /QuerySize=2141
(2140 letters)
Database: Uniprot/SwissProt;
537,505 sequences; 190,795,139 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O22212|PRP4_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-... 599 3e-170
sp|O43172|PRP4_HUMAN U4/U6 small nuclear ribonucleoprotein Prp4 ... 285 1e-075
sp|Q3MHE2|PRP4_BOVIN U4/U6 small nuclear ribonucleoprotein Prp4 ... 282 7e-075
sp|Q5NVD0|PRP4_PONAB U4/U6 small nuclear ribonucleoprotein Prp4 ... 282 1e-074
sp|Q9DAW6|PRP4_MOUSE U4/U6 small nuclear ribonucleoprotein Prp4 ... 282 1e-074
sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protei... 224 2e-057
sp|P20053|PRP4_YEAST U4/U6 small nuclear ribonucleoprotein PRP4 ... 211 3e-053
sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing prote... 190 7e-047
sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protei... 184 3e-045
sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing prote... 169 7e-041
>sp|O22212|PRP4_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein
OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1
Length = 554
Score = 599 bits (1544), Expect = 3e-170
Identities = 291/456 (63%), Positives = 349/456 (76%), Gaps = 8/456 (1%)
Frame = -2
Query: 1755 EVSEESRLFREKQEKAKQDFLMKQRAAALAVPTNDKAVRSRLRRLGEPVTLFGXXXXXXX 1576
E+SEES+ RE+QEKA QD L+K+RAAA+AVPTNDKAVR RLRRLGEP+TLFG
Sbjct: 89 EISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGEQEMERR 148
Query: 1575 XXXXXXXXXXXXXGQLETLMRVLXXXXXXXXXXXXXXXXXXXXXIQYPFYTEGSTALLKA 1396
GQL+ L++ ++YPF+TEG L +A
Sbjct: 149 ARLTQLLTRYDINGQLDKLVK-------DHEEDVTPKEEVDDEVLEYPFFTEGPKELREA 201
Query: 1395 RYWIAKESVLKAAVRLGRARRKRDDPDEDLDAEINWALENAKSFDMDCSEIGDDRPLSGC 1216
R IAK SV +AAVR+ RA+R+RDDPDED+DAE WAL++AK +DCS GDDRPL+GC
Sbjct: 202 RIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGC 261
Query: 1215 SFSSDGKFLATCSLTGVGKIWSMPEV-KIVSSLKGHTERATDITFSPTNNHIATASADRT 1039
SFS DGK LATCSL+GV K+W MP+V ++ LK H ERATD+ FSP ++ +ATASADRT
Sbjct: 262 SFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRT 321
Query: 1038 ARLWNTEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHS 859
A+LW T+GTLL T++GHLDRLAR+AFHPSGKYLGTTS+DKTWRLWD TG ELL QEGHS
Sbjct: 322 AKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHS 381
Query: 858 RSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATG 679
RSVYG+ F DG+LAASCGLD+LARVWDLR+GRSIL +GH+KPV ++FSPNGYHLA+G
Sbjct: 382 RSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASG 441
Query: 678 GEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPV 499
GEDN CRIWDLR ++SLY IPAH+NL+SQ+K+EPQEGYFL TASYDM +WS RDF V
Sbjct: 442 GEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLV 501
Query: 498 KVLSGHESKVTSVDVVADGQSIATVSHDRTIKLWSS 391
K L+GHESKV S+D+ AD IATVSHDRTIKLW+S
Sbjct: 502 KSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
>sp|O43172|PRP4_HUMAN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens
GN=PRPF4 PE=1 SV=2
Length = 522
Score = 285 bits (728), Expect = 1e-075
Identities = 126/233 (54%), Positives = 176/233 (75%), Gaps = 1/233 (0%)
Frame = -2
Query: 1092 ITFSPTNNHIATASADRTARLWNTEG-TLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKT 916
++ P + ++A+ +AD + +LW+ + + +GH R+AR+ +HPSG++LGTT +D++
Sbjct: 287 VSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRS 346
Query: 915 WRLWDTETGEELLYQEGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGH 736
WRLWD E EE+L+QEGHS VY + FH DGSLA + GLDA RVWDLR+GR I+ LEGH
Sbjct: 347 WRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH 406
Query: 735 VKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLV 556
+K + GI+FSPNGYH+ATG DNTC++WDLR++R +YTIPAH NL++ +KFEP G FL+
Sbjct: 407 LKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLL 466
Query: 555 TASYDMTAKVWSARDFKPVKVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
T +YD TAK+W+ + P+K L+GHE KV +D+ +DGQ IAT S+DRT KLW
Sbjct: 467 TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
>sp|Q3MHE2|PRP4_BOVIN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus
GN=PRPF4 PE=2 SV=1
Length = 521
Score = 282 bits (721), Expect = 7e-075
Identities = 125/225 (55%), Positives = 172/225 (76%), Gaps = 1/225 (0%)
Frame = -2
Query: 1068 HIATASADRTARLWNTEG-TLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTET 892
++A+ +AD + +LW+ + + +GH R+AR+ +HPSG++LGTT +D++WRLWD E
Sbjct: 294 NLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 891 GEELLYQEGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGIS 712
EE+L+QEGHS VY + FH DGSLA + GLDA RVWDLR+GR I+ LEGH+K + GI+
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 413
Query: 711 FSPNGYHLATGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTA 532
FSPNGYH+ATG DNTC++WDLR++R +YTIPAH NL++ +KFEP G FL+T +YD TA
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTA 473
Query: 531 KVWSARDFKPVKVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
K+W+ + P+K L+GHE KV +D+ +DGQ IAT S+DRT KLW
Sbjct: 474 KIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
>sp|Q5NVD0|PRP4_PONAB U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii
GN=PRPF4 PE=2 SV=1
Length = 521
Score = 282 bits (720), Expect = 1e-074
Identities = 125/225 (55%), Positives = 172/225 (76%), Gaps = 1/225 (0%)
Frame = -2
Query: 1068 HIATASADRTARLWNTEG-TLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTET 892
++A+ +AD + +LW+ + + +GH R+AR+ +HPSG++LGTT +D++WRLWD E
Sbjct: 294 NLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 891 GEELLYQEGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGIS 712
EE+L+QEGHS VY + FH DGSLA + GLDA RVWDLR+GR I+ LEGH+K + GI+
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 413
Query: 711 FSPNGYHLATGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTA 532
FSPNGYH+ATG DNTC++WDLR++R +YTIPAH NL++ +KFEP G FL+T +YD TA
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTA 473
Query: 531 KVWSARDFKPVKVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
K+W+ + P+K L+GHE KV +D+ +DGQ IAT S+DRT KLW
Sbjct: 474 KIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
>sp|Q9DAW6|PRP4_MOUSE U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus
GN=Prpf4 PE=2 SV=1
Length = 521
Score = 282 bits (719), Expect = 1e-074
Identities = 125/225 (55%), Positives = 172/225 (76%), Gaps = 1/225 (0%)
Frame = -2
Query: 1068 HIATASADRTARLWNTEG-TLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTET 892
++A+ +AD + +LW+ + + +GH R+AR+ +HPSG++LGTT +D++WRLWD E
Sbjct: 294 NLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 891 GEELLYQEGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGIS 712
EE+L+QEGHS VY + FH DGSLA + GLDA RVWDLR+GR I+ LEGH+K + GI+
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 413
Query: 711 FSPNGYHLATGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTA 532
FSPNGYH+ATG DNTC++WDLR++R +YTIPAH NL++ +KFEP G FL+T +YD TA
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTA 473
Query: 531 KVWSARDFKPVKVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
K+W+ + P+K L+GHE KV +D+ +DGQ IAT S+DRT KLW
Sbjct: 474 KIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC227.12
PE=2 SV=1
Length = 462
Score = 224 bits (570), Expect = 2e-057
Identities = 109/225 (48%), Positives = 150/225 (66%), Gaps = 4/225 (1%)
Frame = -2
Query: 1065 IATASADRTARLWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETG 889
+AT +AD T LW ++ T L +GHL R+ R+AFHPSG YL + SFD TWRLWD TG
Sbjct: 238 LATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTG 297
Query: 888 EELLYQEGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISF 709
ELL QEGHS ++ + PDGSL +S G DA+ R+WDLRSG+SI+ L+ H++ ++ +++
Sbjct: 298 VELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAW 357
Query: 708 SPNGYHLATGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKF-EPQEGYFLVTASYDMTA 532
SPNGY LAT D+T +IWDLRK +TIPAHS+L+S +++ E F+ T+ YD
Sbjct: 358 SPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCV 417
Query: 531 KVWSARDFKPVKVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
K+W+ + +K + GHE KV SVD G + +DRTIKLW
Sbjct: 418 KLWNPLNCSLIKSMVGHEEKVMSVD--GYGDRFISSGYDRTIKLW 460
>sp|P20053|PRP4_YEAST U4/U6 small nuclear ribonucleoprotein PRP4
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP4 PE=1
SV=1
Length = 465
Score = 211 bits (535), Expect = 3e-053
Identities = 119/358 (33%), Positives = 205/358 (57%), Gaps = 13/358 (3%)
Frame = -2
Query: 1431 FYTEGSTALLKARYWIAKESVLKAAVRLGR--ARRKRDDPDEDLDAEINWALENAKSFDM 1258
F+T ++ L+ AR ++ S+ ++ RL + R ++ + ++L + L+ + ++
Sbjct: 109 FFTPATSELIFARRFLINYSLERSRKRLQKEMERHQKFNTRQELLSR-RTELQRMANLEL 167
Query: 1257 DCSEIGDDRPLSGCSFSSDGKFLATCSLTGVGKIWSMPEVK-IVSSLKGHTERATDITFS 1081
S++ +P+S S S+D +AT S G ++ + ++ + L H + I +
Sbjct: 168 AGSQLVSTKPISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWH 227
Query: 1080 P-TNNHIATASAD---RTARLWNTEG--TLLNTYKGHLDRLARLAFHPSGKYLGTTSFDK 919
P +NN + + + D + + N EG LL GH R++ + +HPSGK++G+ S D
Sbjct: 228 PDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDM 287
Query: 918 TWRLWDTETGEELLYQEGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEG 739
TWRLWD T +ELL QEGH + V+ L F DGSL S G+D+L+ +WD+RSG ++ L G
Sbjct: 288 TWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAG 347
Query: 738 HVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKK--RSLYTIPAHSNLISQIKFEPQE-G 568
H KP+ +++SPNGY +ATGG D +WD+RK+ L I AH N+++Q++F ++ G
Sbjct: 348 HSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGG 407
Query: 567 YFLVTASYDMTAKVWSARDFKPVKVLSGHESKVTSVDVVADGQSIATVSHDRTIKLWS 394
LV+ YD V+S+ + + L+GH K+ S+D+ + + + DR+IKLW+
Sbjct: 408 KKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800
OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 190 bits (480), Expect = 7e-047
Identities = 102/275 (37%), Positives = 149/275 (54%), Gaps = 2/275 (0%)
Frame = -2
Query: 1215 SFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTA 1036
+FS D + LA+ S K+W K +SSL+GHT+ I FSP + +A+AS D +
Sbjct: 943 AFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSV 1002
Query: 1035 RLWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHS 859
RLWN + G H D + + FHP GK + T S D T +LW+ TG+ L HS
Sbjct: 1003 RLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHS 1062
Query: 858 RSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATG 679
+ G+ + PDG L AS D R+WD +GR + L GH V FSPNG +AT
Sbjct: 1063 DKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATC 1122
Query: 678 GEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPV 499
D T +IWD ++ + L T+ H+N + I F P +G L +AS+D T ++W K
Sbjct: 1123 STDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSP-DGKILASASHDQTVRIWDVNTGKCH 1181
Query: 498 KVLSGHESKVTSVDVVADGQSIATVSHDRTIKLWS 394
+ GH V+SV DG+ +A+ S D+T+++W+
Sbjct: 1182 HICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWN 1216
Score = 178 bits (449), Expect = 3e-043
Identities = 93/275 (33%), Positives = 148/275 (53%), Gaps = 2/275 (0%)
Frame = -2
Query: 1215 SFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTA 1036
+FS +G+ LATC ++W + K++ +GH+ + FSP +A+ AD
Sbjct: 649 AFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENV 708
Query: 1035 RLWNT-EGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHS 859
+LW+ +G + T GH + +AFHP G+ L + S DKT +LWD + G L GH+
Sbjct: 709 KLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHT 768
Query: 858 RSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATG 679
V + F PDG+ AS D ++WD+ G+ + L+ H V ++FS +G LA+G
Sbjct: 769 DWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASG 828
Query: 678 GEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPV 499
D T +IW+ L T H+N + I + P + LV+ S D T K+W + +
Sbjct: 829 SGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP-DSKILVSGSGDRTIKLWDCQTHICI 887
Query: 498 KVLSGHESKVTSVDVVADGQSIATVSHDRTIKLWS 394
K L GH ++V SV DGQ++A VS D++++LW+
Sbjct: 888 KTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWN 922
Score = 160 bits (404), Expect = 4e-038
Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 2/245 (0%)
Frame = -2
Query: 1221 GCSFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADR 1042
G +FS D + LA+ S ++W++ + L HT+ + F P IAT SAD
Sbjct: 983 GIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADC 1042
Query: 1041 TARLWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEG 865
T +LWN + G L T H D++ +A+ P G+ L + S D++ RLWD TG + G
Sbjct: 1043 TVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRG 1102
Query: 864 HSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLA 685
HS VY F P+G + A+C D ++WD + G+ + L GH V I+FSP+G LA
Sbjct: 1103 HSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILA 1162
Query: 684 TGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFK 505
+ D T RIWD+ + + H++L+S + F P +G + + S D T ++W+ + +
Sbjct: 1163 SASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSP-DGEVVASGSQDQTVRIWNVKTGE 1221
Query: 504 PVKVL 490
+++L
Sbjct: 1222 CLQIL 1226
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466
OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 184 bits (466), Expect = 3e-045
Identities = 95/279 (34%), Positives = 154/279 (55%), Gaps = 2/279 (0%)
Frame = -2
Query: 1227 LSGCSFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASA 1048
++ +FS DG LA+ S ++W + K + L+GHT + F+P + +A+ S+
Sbjct: 1161 VNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSS 1220
Query: 1047 DRTARLWNTEGT-LLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQ 871
D+T RLW + L T++GH + + F+P G L + S DKT RLWD + + L
Sbjct: 1221 DQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTF 1280
Query: 870 EGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYH 691
+GH+ V + F+PDGS+ AS D R+W++ S + + +GH V ++FSP+G
Sbjct: 1281 QGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTM 1340
Query: 690 LATGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARD 511
LA+G +D T R+W + LYT H+N + + F P +G L + S D T ++WS
Sbjct: 1341 LASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP-DGAILASGSGDQTVRLWSISS 1399
Query: 510 FKPVKVLSGHESKVTSVDVVADGQSIATVSHDRTIKLWS 394
K + L GH + V S+ DG +A+ S D+T++LW+
Sbjct: 1400 GKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWN 1438
Score = 181 bits (459), Expect = 2e-044
Identities = 95/283 (33%), Positives = 153/283 (54%), Gaps = 2/283 (0%)
Frame = -2
Query: 1242 GDDRPLSGCSFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHI 1063
G + ++ FS DGK LA+ S ++W + + + + KGHT R + FSP + +
Sbjct: 904 GHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLML 963
Query: 1062 ATASADRTARLWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGE 886
A+ S+D+T RLW+ + G L ++GH + +AF+ G L T S D+T RLWD + +
Sbjct: 964 ASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQ 1023
Query: 885 ELLYQEGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFS 706
+GH+ V + F DG++ AS D R+WD+ SG + L+GH V + FS
Sbjct: 1024 CFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFS 1083
Query: 705 PNGYHLATGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKV 526
P+G LA+GG+D R+WD+ LYT+ +++ + + F P G L S D ++
Sbjct: 1084 PDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSP-NGVTLANGSSDQIVRL 1142
Query: 525 WSARDFKPVKVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
W K + L GH + V +V DG ++A+ S D+T++LW
Sbjct: 1143 WDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185
Score = 178 bits (449), Expect = 3e-043
Identities = 93/273 (34%), Positives = 147/273 (53%), Gaps = 2/273 (0%)
Frame = -2
Query: 1212 FSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTAR 1033
FS + LA+ S ++W + + + +GHT + F+ + +AT S D+T R
Sbjct: 956 FSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVR 1015
Query: 1032 LWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHSR 856
LW+ + ++GH + + F G L + S D+T RLWD +G L +GH+
Sbjct: 1016 LWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTS 1075
Query: 855 SVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATGG 676
V + F PDG++ AS G D + R+WD+ SG + L+G+ V + FSPNG LA G
Sbjct: 1076 CVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGS 1135
Query: 675 EDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPVK 496
D R+WD+ K+ LYT+ H+N ++ + F P +G L + S D T ++W K +
Sbjct: 1136 SDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSP-DGATLASGSGDQTVRLWDISSSKCLY 1194
Query: 495 VLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
+L GH S V SV DG ++A+ S D+T++LW
Sbjct: 1195 ILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLW 1227
Score = 177 bits (447), Expect = 4e-043
Identities = 92/274 (33%), Positives = 148/274 (54%), Gaps = 2/274 (0%)
Frame = -2
Query: 1212 FSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTAR 1033
FS DG LA+ + ++W + + +L+G+T + FSP +A S+D+ R
Sbjct: 1082 FSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVR 1141
Query: 1032 LWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHSR 856
LW+ + L T +GH + + +AF P G L + S D+T RLWD + + L +GH+
Sbjct: 1142 LWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTS 1201
Query: 855 SVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATGG 676
V + F+PDGS AS D R+W++ S + + +GH V + F+P+G LA+G
Sbjct: 1202 WVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGS 1261
Query: 675 EDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPVK 496
D T R+WD+ + L+T H+N ++ + F P +G L + S D T ++W K +
Sbjct: 1262 SDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEISSSKCLH 1320
Query: 495 VLSGHESKVTSVDVVADGQSIATVSHDRTIKLWS 394
GH S V+SV DG +A+ S D+T++LWS
Sbjct: 1321 TFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWS 1354
Score = 174 bits (439), Expect = 4e-042
Identities = 91/274 (33%), Positives = 150/274 (54%), Gaps = 2/274 (0%)
Frame = -2
Query: 1212 FSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTAR 1033
FS +G LA S + ++W + K + +L+GHT + FSP +A+ S D+T R
Sbjct: 1124 FSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVR 1183
Query: 1032 LWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHSR 856
LW+ + L +GH + + F+P G L + S D+T RLW+ + + L +GH+
Sbjct: 1184 LWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTS 1243
Query: 855 SVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATGG 676
V + F+PDGS+ AS D R+WD+ S + + +GH V ++F+P+G LA+G
Sbjct: 1244 WVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGS 1303
Query: 675 EDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPVK 496
D T R+W++ + L+T H++ +S + F P +G L + S D T ++WS + +
Sbjct: 1304 GDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSP-DGTMLASGSDDQTVRLWSISSGECLY 1362
Query: 495 VLSGHESKVTSVDVVADGQSIATVSHDRTIKLWS 394
GH + V SV DG +A+ S D+T++LWS
Sbjct: 1363 TFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWS 1396
Score = 171 bits (433), Expect = 2e-041
Identities = 90/274 (32%), Positives = 142/274 (51%), Gaps = 2/274 (0%)
Frame = -2
Query: 1215 SFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTA 1036
+FS DGK AT G+ + W K + + KGH + FS +A+ S D+T
Sbjct: 871 AFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTV 930
Query: 1035 RLWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHS 859
RLW+ + G L T+KGH R+ + F P+ L + S D+T RLWD +GE L +GH+
Sbjct: 931 RLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHT 990
Query: 858 RSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATG 679
VY + F+ DGS+ A+ D R+WD+ S + +GH V + FS +G LA+G
Sbjct: 991 GWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASG 1050
Query: 678 GEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPV 499
+D T R+WD+ LYT+ H++ + + F P +G L + D ++W +
Sbjct: 1051 SDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDISSGNCL 1109
Query: 498 KVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
L G+ S V + +G ++A S D+ ++LW
Sbjct: 1110 YTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLW 1143
Score = 169 bits (426), Expect = 1e-040
Identities = 90/273 (32%), Positives = 143/273 (52%), Gaps = 2/273 (0%)
Frame = -2
Query: 1212 FSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTAR 1033
FSSDG LA+ S ++W + + +L+GHT + FSP +A+ D+ R
Sbjct: 1040 FSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVR 1099
Query: 1032 LWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHSR 856
LW+ + G L T +G+ + L F P+G L S D+ RLWD + + L +GH+
Sbjct: 1100 LWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTN 1159
Query: 855 SVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATGG 676
V + F PDG+ AS D R+WD+ S + + L+GH V + F+P+G LA+G
Sbjct: 1160 WVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGS 1219
Query: 675 EDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPVK 496
D T R+W++ + L T H++ ++ + F P +G L + S D T ++W K +
Sbjct: 1220 SDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNP-DGSMLASGSSDKTVRLWDISSSKCLH 1278
Query: 495 VLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
GH + V SV DG +A+ S D+T++LW
Sbjct: 1279 TFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLW 1311
Score = 169 bits (426), Expect = 1e-040
Identities = 90/274 (32%), Positives = 143/274 (52%), Gaps = 2/274 (0%)
Frame = -2
Query: 1215 SFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTA 1036
+F+ DG LAT S ++W + + +GHT + FS +A+ S D+T
Sbjct: 997 AFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTV 1056
Query: 1035 RLWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHS 859
RLW+ + G L T +GH + + F P G L + D+ RLWD +G L +G++
Sbjct: 1057 RLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYT 1116
Query: 858 RSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATG 679
V L F P+G A+ D + R+WD+ S + + L+GH V ++FSP+G LA+G
Sbjct: 1117 SWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASG 1176
Query: 678 GEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPV 499
D T R+WD+ + LY + H++ ++ + F P +G L + S D T ++W K +
Sbjct: 1177 SGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNP-DGSTLASGSSDQTVRLWEINSSKCL 1235
Query: 498 KVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
GH S V SV DG +A+ S D+T++LW
Sbjct: 1236 CTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLW 1269
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124
OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 169 bits (428), Expect = 7e-041
Identities = 92/274 (33%), Positives = 150/274 (54%), Gaps = 4/274 (1%)
Frame = -2
Query: 1215 SFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIATASADRTA 1036
S S DG+ +A+ SL K+WS + ++ +L GH + ++FSP IA+ +D+T
Sbjct: 1079 SISRDGQTIASGSLDKTIKLWSR-DGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTI 1137
Query: 1035 RLWNT-EGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEELLYQEGHS 859
+LW T +GTLL T GH + + F P GK L + S D + +LWDT +G+ L+ GHS
Sbjct: 1138 KLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHS 1197
Query: 858 RSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHLATG 679
V + F PDG A+ D ++W + G+ + L GH V +SFSP+G LA+
Sbjct: 1198 AGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASA 1257
Query: 678 GEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVWSARDFKPV 499
D T ++W + + + T+ H++ + + F +G + +AS D T K+W+ + +
Sbjct: 1258 SADKTIKLWRIADGKLVKTLKGHNDSVWDVNFS-SDGKAIASASRDNTIKLWNRHGIE-L 1315
Query: 498 KVLSGHESKVTSVDVVADGQSIATVSHDRTIKLW 397
+ +GH V +V+ + D IA+ S D TI+LW
Sbjct: 1316 ETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLW 1349
Score = 159 bits (402), Expect = 7e-038
Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 3/239 (1%)
Frame = -2
Query: 1236 DRPLSGCSFSSDGKFLATCSLTGVGKIWSMPEVKIVSSLKGHTERATDITFSPTNNHIAT 1057
++ + G SF+ G +A+ + KIW + + K + +L GH + FSP +A+
Sbjct: 1404 NKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLAS 1463
Query: 1056 ASADRTARLWN-TEGTLLNTYKGHLDRLARLAFHPSGKYLGTTSFDKTWRLWDTETGEEL 880
AS D T +LWN ++G T KGH D + ++F P GK + + S DKT RLWD+ +G +
Sbjct: 1464 ASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLI 1523
Query: 879 LYQEGHSRSVYGLDFHPDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPN 700
H+ VY ++F+PDGS+ AS D ++W G + GH V SFSP+
Sbjct: 1524 KSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPD 1583
Query: 699 GYHLATGGEDNTCRIWDLRKKRSLYTIPAHSNLISQIKFEPQEGYFLVTASYDMTAKVW 523
G ++A+ ED T +IW + L T+P H + F P +G L++ S D T K+W
Sbjct: 1584 GRYIASASEDKTVKIWQI-DGHLLTTLPQHQAGVMSAIFSP-DGKTLISGSLDTTTKIW 1640
Database: Uniprot/SwissProt
Posted date: Thu Sep 27 17:53:50 2012
Number of letters in database: 190,795,139
Number of sequences in database: 537,505
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,722,207,366
Number of Sequences: 537505
Number of Extensions: 15722207366
Number of Successful Extensions: 80020187
Number of sequences better than 0.0: 0
|