Simple sequence repeat (SSR)
>UN12292 CTAAAGGTAGTTCTCGCAATTATGTAGGTTCTAAAAATAAATTCCCCCGTGTGTGTGTGTATTATACACACACATACATATAGGTTATGTTTAC GAAGCAAGATTTATGTTGATTGAATATGATATGATGGATAGATTTATGTATCATGCTTGTTTTGACATAATAGATTGATTTTGTTTTTTTTCCT TTTGTATCCAGATATGTTATGTTTAAAAAGAAGCAAGAGT |
Primers for UN12292 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAGGTAGTTCTCGCAATTATGTAGG | 59.218 | 25 | CAATCAACATAAATCTTGCTTCGT | 59.582 | 24 | 113 | 4 | 116 |
2 | GGTAGTTCTCGCAATTATGTAGGTT | 59.104 | 25 | CAATCAACATAAATCTTGCTTCGT | 59.582 | 24 | 111 | 6 | 116 |
3 | GGTAGTTCTCGCAATTATGTAGG | 57.101 | 23 | CAATCAACATAAATCTTGCTTCGT | 59.582 | 24 | 111 | 6 | 116 |