Simple sequence repeat (SSR)
| >UN09136 TAAAGACATGAAACAGCGAAGTACTATTTCCTTCAAGTCCCATACGCAGTCAACCTTATATTTGTTCCCCATGTCCATCTAATGTTCTCACCAG ATAATTTAACTAACAAATAAAAAAAATGAATTCCAGAACCAGAGCAGTCAGCATCATATGGATTTAGAGCAACATGCCTCCATAATGATTATTT GTTAAAGATGCTAAAGTAAAAAGAAAATAAACCATGGGCATCGAGAGGTCTCTGTTGGTAATGGATAGAGTTGAATGTTGACCATTGACCATTC AGCTCATGTATGACCTGGGACAAACGAGGCTCCTGATCTTGGAGCTCAACGAAAGAACCATGATACAAAGAAACAGGCAGTAGAGCCAGTTTCT AGACACAGAAGAATTAGCCTTCCGAGAACTTAAGCCAGCAGTATCATGCGAATTTGCAGAATTAACGTCACTTTGCCCCAACCCGAATGAGAAA ACAATGTCGAGATGACCATTTTTGCCAAAAGACCAGTCCAGCTTGCTATCTGCAAAAGAAATATCTCTTATACGGATTATCCCTGTAGTGACAC GAACCGAGGTAGAAGCTTGAGCAGCAGCAGCAGCCAAATATTTTGCAGAACACTCTGATGCATATGCAGATGAAGCAGACATGTTGCCCAACAT GTAACTCGCCCTCTGGAGAAATGGGTATGCAATATCTGTTGGCATATCTGCCTCTTGTTGCTTTGATGAGGAGACGAGATCATTACTCGGTCCT TCAAATAGTTGTTGGCTTGCTGCACTCGTCTCGTGATTTCCTTCTGCGTGACTAGTTTCTGCTGAATCCGGATGCGCTTGGTTTGAGGTGGAGG CACCATTGTAATTCTGTCCTTCAAGGTCACCTGTCGCCAAACGTGAACCGTCCTTCGATGAGGCAAAATCATTGTTCTGATCTTCAAAGAATTG ATCGCTAATATCACCCAGTTGATGAGTTTCTTCTTTAGCATCCTCGAAAATAAGGGGTGATTCTGCGAGAATATTCTCGTTTACAAAAGAATCG AAAGCGTAATCCAAGTTTTCCATCTCTGGATTAAGAAATGAGGTGTAATCATTAAACATTTCAACGCCGGACTCTGTCTTGACTTCAGTTTGCA GGTCATCTGATTCGAAGAATGAATTTCCATCAAATTGCAAGTCACCAGTAGAAGCATCAAAATATGGTGCATCAAGAAGATAATCCACATCATA ATCAACGTCATTGCTTATGTCATTGCTTATTTCAGCAATGTATTCATGCTTCACAGACGTGGGATCCAACTCATTCTGCACAGGTAAATCAAAC AATTTAGGCCCGTCTTCGTTGTTGGCCTGAGGTTGATCCACCAAGGCGCTTTGTGGGTCATCAATCGTTTCGCTGGATACATCAGCACTGTTGA CATTATCACGCTGATGGTAGTCTAATAAAAGAGGCCCATCTTTAGGTGGCACGTCTGAGCCAAGAATCTGCTCAATGTCATCTTCATCTAGATA TGCATCATCTTCATAATCAACAGGAAATTGCATAGCAGACTCTTGCTTAGTGGCCAATGTCGGCTCATCCACATCCCATTCCTCGTCAACAAAT GGTGCCCCATATTGTTCACCGTTTTTCGGCCCAGAACCACTCTTGCGGAAGATCCTACAAAGAACAAATGAGTCCTGAATTCCTTTTTTTTCCA ACTCCTGATCGATGAGTCTGTACTCGTGCATAACCCAGTTAGTCCTCTCTCCCTTTGGTGCCCGACCAATATGATAAACCAAGGTCTTCTTCAT CCCAACCAATTGAGACCTATGGTAAACAGACCTGTCTTTCCCAGTCGTCTTCCAATACCCTCTATCAGTTGCTCGATTGGTACGAGAACCATTC CCATACTTCTTATCCAAAACACTAAAGAAATACCATTCCAAGTCTCGGGTCTTTAGCCTCGACAAATCTGGAAGATCCCAAGGTTCAACTTTAT AAACTTCAACATCAGAAATAGCATCATATCTAAAAGGCCTCCCACAAATCTTACGCCTTAAATAATATACCATGAGCTCTTCATCTGTAGGATG AAACCTAAACCCAGGTGCTAATGATTGCGACTGTGACTGCCCTGTTTGGGTTTGTGTTGGTTGATTTGAATCGATTACAATTGCCATAAAATTG GATTAGGGTTTGATGTGAATGAAAGTGAAAAAAGAGAAGGCTTTTTGTATTTGATTTGAGATGGT |
Primers for UN09136 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TAAGCCAGCAGTATCATGCG | 59.999 | 20 | TTTCTCCAGAGGGCGAGTTA | 59.948 | 20 | 273 | 407 | 679 |
| 2 | TAAGCCAGCAGTATCATGCG | 59.999 | 20 | ATTTCTCCAGAGGGCGAGTT | 60.212 | 20 | 274 | 407 | 680 |
| 3 | CCTGTAGTGACACGAACCGA | 59.745 | 20 | CATCAAAGCAACAAGAGGCA | 59.988 | 20 | 175 | 552 | 726 |