Simple sequence repeat (SSR)
| >UN08673 AAAAAAAATGAACCAAAAAGTTATAATTAGCATAATATGCACACAATAGAATACAAAGCTTAAACAAACAAAACATATTATACATGCACAATGA ATGCCGAAATAACATAAAGAAAACAAAGCATTGGCGTTTATTCAAATTAAGACATCGGGCTCCACTAAGCTCCCAGTATAATTCACCTTGCAAG ATTCAGGAAACCTCAATCCAGCTTCATCACAGCCAGCTTTAGTAACATGAGGACATGACCGCACATCAAGGTATTCCAACGATCTGCACGCCTC CAAAAGCATACCTATTCCTAAAACCGTGATCTTTGGACAGTTACTGACTTTCAAAACCCTCAAACCCAACCCAAGTCCCTCTGTATCCAATGAC TCAAATGCAGCATCTGTCACCTCTTCACAGCAACCAATATCAAGAACCTCTAAACTAGTGCATTTTGAAAGTATGGAATTTAATGAAGCATCCG AAACATTTAAACACCAATCCATCCTTAAGATCCTAAGGGTATGAGTAGAAGAAGCTAGGGACGTTATTGATTCACTAGATAAATCCCGACACCC TCCAATAATTAAAGTTTCAAGATTTTTGCAGAGGTTAGCGACTGCTAATATAGACTTATCTCCAAGTTTATAACAATCGAGCAGCTTTAGTGTC CTTAAGGAAGTTGAGCAAGCTTCTGCGATGGTTGATATCCCAATGTCTCCAACATTAGTACACTTGTTTACATCCAAATGTTTTATGTGTTTAC ATCCATTAACTAAAGCAATTAGTCCTGTGTCTGTGATATTGGTGCAGCCTTGCAGACCCAACTCTTGTAAATTCTGACAGTTTTCAGAGAGTGA TTCTAGTAGTTTGTCGGTAACAAAGCGGCAACCAGTAAGATGTAAGCTTTTTAGACCATGGCAACCCTCTGCAACAGCTGACAGCCCCTTATCA GTTAGCTTCCTACAGTATGAAACGTCTAATGACTGCAGAGAAGAAAGAGCAGATCCAATAGCCGTCATTCCAGCATCGGTGATACCTTTACAAT TCTGCAGCTTCAAGAAACACAAATCAGGAAAGCCAGAAGCAATAACAGTAAGATCTGAATCAGTAACACCAGGATAAAAAGACCTAGAAGCAGA CTGAGAAAGATCAAGATCCTTCAACCTAGTAAACCTAGCAGCCATTTTTCTCAACATGTGGGGCCCAGCACGTGCACAAAGCTTCTTCCTTTCT GTACTTTGCAAAAACAGCCATCTTTTGCAAACCAGACCAAACACTTCTTTGTCTTTGTCTGTTTCTAGCTTTGATAAGATTGCTCGTAGCTCAT CATCTCTTAGTTGTGAGTTTATTATTGCTTCTGGGTTCATGGTGAACCACCCTAGCTAGTGTGTGTGTTTAGGTGTTTTTGTGTGTGTGTGTTT TATTATGTGAGTTTGGGGGTGGTGATGGTGATGATTGAGTGAGTGATTATGGTATGATGTGGGGCCCATATGGGTTATGTTGTTG |
Primers for UN08673 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTTGCAAACCAGACCAAACA | 60.127 | 20 | ACCACCCCCAAACTCACATA | 60.088 | 20 | 188 | 1246 | 1433 |
| 2 | CACGTGCACAAAGCTTCTTC | 59.64 | 20 | ACCACCCCCAAACTCACATA | 60.088 | 20 | 237 | 1197 | 1433 |
| 3 | TTGCAAACCAGACCAAACAC | 59.591 | 20 | ACCACCCCCAAACTCACATA | 60.088 | 20 | 187 | 1247 | 1433 |