Simple sequence repeat (SSR)
| >UN00857 TTTTTTTATTCTAACGAAATTTCATTCAAATTTATTTATTGAAATCACACACATGTTTATTATTAGTTGACGATAACTCGCAACCTTAGGACAC CAGCAGACTGACACGGACTATTACGATCAAACCCACACATAAAAGTGAAAAAACGAGAACTGCAAATTAATGCAGTTATACAAGTGAACTCAAG CATCAATTGGAACCAGCTCAATCCTCACTGGACACAGAAATTAACTAATCATCATCACCAATCTGAAGCTGCTCGTTCTCGTTCTTAGAAATGG TCACATCTTCAATCGGATCGAACCAGCTCAATCTTGATCTCAGAAATGGTCACCTCCTCAGCCCCTGCTCTGGGCACCAAAGTCACCAAAACAT AGTCTTCATCTTCAGCATCAACATCCTCCAACAGCTGTGTGATTCCATACCCGGCCCCACTTGTTGTGAACATATTCCCACCATACTGGTGTGC CATTTCCGTGTAAGAACCAGCAAACTCGCTATCAGCTGCAGTGGTCTCAATTTCATCGTCAACGGCATTCACCAACACATCAAATGTTAAATAT ACGCTACCGTCGAATTTGATTCCGTTCAAGAACAACACCTCTTTTGCATTTTGCTTGTCCTTATTGCTTCTCTTTTTGACAGGCCTCTTTACGT ATACCTTAATTACCGTGTCTAGCTTCACCGGGAATACCATGTCTTCCACTCTCTTCACATAATCTAATTTCTTCTTCTTTTTATGACGTGGAAC TGACCTATAATTTTCCCATGGGTTTGGGGACTTTTCGAACTCATATCCCATCCGTATTGTGTCTAAACAATCTTTGTTGCGGACACGTACAAGC TTCCTGTTCTCATCATAAAACACATATGATGCATGGTTCCAGTCATCGGACTTTGGCTCTTGGTGTTTCGGGTCCAAATCTTTCCAGATTGTCC ACATCCGATCAATGTTGGCATGATGGGCGTAAAATATTGGGTCATACCCAGCTGAGTAGACGCCTCCCATGTCCTCGTTCATCGGCAACCTAGG GTTACCAGTCCAATCATGAACCGCATTGTGAATTGAATTCTCTATGCATCCAGCACTTAGCTGATGATGATGATGATTAGTAGAAGTCCCATCT GGTTGGATAGCGGGGTAGGGGTTGGGGGGCGAGGGGTCAACACCAAAGAAGCTTTTAGCAGAGTATGCATTGTCAATCATCTGTCTTCGCATAA TACACAGATTTTGTTGTACCAGCATTGCAGGGTAATCGTTTTTTCCTTCATAACAGTTGAGATCTATGGCAGTCGGGGGGAGGTGTTCGCCATT CCGGTGAGGGTCAAATAGAGGGTTGTTTCTAGCATTACCTCTCCCTTGGGCTTCATACATAGCAGGAATTACCATTCCAGTTGGATGGTCCCAG TTCCAGTATGGTAAAGCGAATGTTTCGTCACCAATTAACTTTCCTAATATCCTCTCATGGAAATAGAGATACCAACGGTGGAATGGAAAGAAAA GCGAGGATTTGCGAACGTCGATTCTATAGGTAGAACGTATATTGTTTCCTTGTATGTATGCCTTGCAACAATACGCACAATGGATCTTAGCTTG TTGGTTCCAACTGAGTGGATCGTCATCTTCGAGATCCTTCATTATTTTAACTGCCAATTTATACTTATTGATATACTCTGGAGTGACTCTCTGT GCCGCGGGTCGGACACGTGTATTTTGGAAGGCGGGCAACTTGTAACTTTCCGGTCGAACGTATGGATCTAGTGGTTTAGGGCAACAATTACCGC CCCTCAAAGAGTTTGTAGGGACATTCACGTCATAGCAGTTTCGGATATCTTCAGGAGCTGTCACCTCGTATGTTTTGTGATCATCATCTCCCGC ACCATTGCATGAGACTTTGAAGCGACGTGGTGATGGTTTAGAAAACAATGGAGAACGAGAACAAGTATTTGGCTTTTTAGTAGTAGCAGTGATG GGAAGAGTGGATAAGCTCAAAGAAGCCATCATGTTTGGCTATTGGTGGTGCTTCTAA |
Primers for UN00857 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATCATGAACCGCATTGTGAA | 59.931 | 20 | TTCTTTGGTGTTGACCCCTC | 59.943 | 20 | 132 | 1047 | 1178 |
| 2 | TCATGAACCGCATTGTGAAT | 59.931 | 20 | TTCTTTGGTGTTGACCCCTC | 59.943 | 20 | 131 | 1048 | 1178 |
| 3 | AATCATGAACCGCATTGTGA | 59.931 | 20 | TTCTTTGGTGTTGACCCCTC | 59.943 | 20 | 133 | 1046 | 1178 |