Simple sequence repeat (SSR)
| >UN08153 TGCAGGCCACGTATCAGTCCATAAGAGTTTGTGTGGCTCATATCCTTATAAGACAGCACAACATTGTTCTTTGCCGTGACATAATCAGCAATAT TGTGGTCAAGGACCAATCGCAGAAGCCTGTTAAGCATTGTCAGATCAATCTTTTCAAAGAACTTCTCAAACTTGGTCTGAAGCATCACCACACA CTGACCATCACCAGTGTCCCATATACCCTGCAAATTGTTTATGCCCTGGCACCATTTATACACCAAGAGTGGTGGTGGCTCAGAATCTGCAGGC TTGATCCAATTGGGAAACAGATGACGCTTGTCACCTTCGTACCACAAGTATTGATCAAGATATGCGTCGGTGATTTTTTCAAGAGGCTCAATCT CATAGACTGGAATCAGATAGCTATACAAATCCATAAACTCGATCCCAACTTCTTTGAAAGCACGCTGGGTAAGAAGATGACGTTTTATTCTTGA TAACGCCTCATGTGGATTGTCATAAGCTTGTTCAATCAAACCCAGTTCTTCTCTTTGGAGCTGATTTAACCTCACAGCCACACTATAAGATTCC TTAAGCCTCTCAAGAGCAAGAATAAGAAGCTTTGTATCGTGCTTGTAAGACAATGGTGGGAACGGTATGGGTGAGAACTTTCTAGATTCCAACC AGTGCACTGTAGTAGTGTAGATAGCCACAGCTTCTTCTGGGGTGACATACGGACCATCTTTTAAGTAGTTGTGTTGGCGTTCCTGCTCTGCCTT CAACCAAAGACGAGTCAGCCTACCTAAGTTCTTCCTGCAGACAGTCTTATCAACTGTCGCACCCCTCCGTATACGTTCACGATTATAGTGAGCA ACATTTGTCCACCAATCAGCTTTTGACTTCACATACCGGAGAATCATGTTCTCGATTGGAACAGGCAATCCCGGAACCTTCCAGGGGATATTTG CCTTCCAACAACGCCATGCTTCACTCAAGTGCTGCAAGATGGTCCTCGCCTTATTTTGCTTTATTCCCTCTGGCATGGCATCAAGAACATCATG CATCACAGCAGCACGAAGCTCCAGATCGAAATGACTTTCAACACGTTGCTTTGTAACAGTCTTAGCCACGCCTTTAGAATGTCGACCCTCAAAC TGGCGAGCCAGTAGATTTCCCAGCCACCTCTCCAGCAAAGGCACTATACCACGTAGGAAAAACAGCCACACCCTCCACATAGGTGCCCAAAAGC CACATCCAGGGCCTTTACCAACAGGCCCGGTATTGAACCGGTAATAGATCAAATGTTTCAAATCTTTGCACATCCGAATCTGCCTCATGAGTCG GTACTTGTAACGATACATACCAGTCAACTGGCCAACATGGGAAAAGGTATATTGTAGACCATCAGCCAACTGGAAAGCATCCACATTCCCCAAC CGGAACTGAATATTTGCATCAACTACGAGCTTTGTCAAACGCAAGATCTCACGGCATAAATGGAAAGCATTTCCAAACCGTGACTTCTTACGCT CCTTGGTAGTAAGAGTCTTAACAGGCTTCAGATTAAAATTGTAATCAAGATGAAGGTAATTTAGATTCTTTCTATGGATCAACAAGTTCAGCAT GTTATACCCCTGCTTACAAACTTGCAGACCTGCTTCAGCCCAATCAAGTTCAGTAGTCTGGAAAAACTTGGTAGCCTGGAGTGAACGGAACAAG TGCTTCTTCTTTTGAGCTTTTGGCGGTCTATGATGCAACTCATTCAAAACAAAGCATTTCAACAATTTCTGATAGCTAACCCTTACTTTCACTG GATAAGAAGGCGGGCAGTGTTCTTTATACCACTCAGACACAAGAGGGATATCTTCAGCACGCCTCATCCGACCAGATCTCATGTTGAAGGGACG AGGTGCAAATAACAAGGAAATACCAGCAGCTGTAGTGTCCGTATATAAGGGAGTGTTAGTAAGCAAGGGCTCGACACCATCTGGCAAAGAGAAA TCATCCTCGTCATCATCCTCGTAGGCTATCTTAGCACGCCGATCTTTGTTAGCAGCAGTTATTGGATGTATAAGGGGATCATAATAAAATGCAG GCAAATCAGGATCCTCAGTTTTTATGTACATGACCATTGGTGTATGATATACACACAATCTTACTTTCCTTGGCCTATTGTTGTACAGATGAGG GAAAGCAATCCTGTACTCTGTCCTCAAAGGTGAACGGATAATAAGTTTATTAATATCATTAAACTCATTCCAGTCCTCATCACCTTTCTCCATG TCACGATACAAGGGTTCAAATTTCGGGCCACCTGGTATGCACATATTAAGAGCTTTGGCGGTGAAAAATGACTCCATATCAAACAAGTAGAAAT AGTTTCTATCAATCAGATCAGAAAGTAGCTGTCCTGCTAATCGATGAAGTGTTGCCATGATAGGGAGTGAGAGATGCCATTTCCGGTAACTTGG TCCGTTAATAAGCTTTGTCTTCACAAGAGGCTTATGGTCATAGAACCAAGTATAGACAGCAGAATCTTCCTCCTCGTCCAACTCCAGTTGTATT GGTTCCAAAGGATCCACATCCAGAAGATTGTCAGCATAATCCAATGGAGGCTCTTCATCATCAAAAGGAGGAAACCGCATTCTCTTGAAATGTC TGCGATCCCTCTTCTCCCTTCTCATCATGATCCACATGGTTCCCCACTGAGCAAGATATATTGGTTCAACAACCCATGGAATCTCATTAACAAA CGTGATTGCGCCAGTAATGTGATATAGCACCTTTACATCACGGACCTGTTCCCATGGCATGGGCATGTTTTCTAAAAGCTTGTACACAGCATGA GGAACAAACTTAAGTGCCCCCAGATATACACGTTTGTCATGTCGATATTTCTTCGATGACATGTCACCATGATCCCTGATAATCTTCCGAACAT GTTCAGGAGGCATATCCTCCTTCTGAGTCTCAACGAAGCCAAATTTCCTCTTATCGCCATACCGCTTCGAGTTCAGCTGCATCCACTTCCTCGC TTTCTCCTCCAACCTCGCTTCCGCTTCCGCCGCCGTCGGCAACACCGTGTACGACGGCTGCGCAGCTGCCGGAGGTAGAATCGCTCCTCCTCCT GTCCCCGGCGGGGCTAACGGCGGAACGTTCATTCCGTTACCGTTGTTGTTGTTGTTCCACATGTCCTGTGGCGGTTGATTGTTATTGTACATGG TGCGTTAGTGGAGGTTAATCATCAATAAACACTAGGTGTTGATTGATGACGTAAGCAAGTGTGTGAGTGTGTGTGTGTTTGGTTAGGGTTTGGG GAAGGCTAGGGTTTTGGATCTGGTGTGAGTGAGGGGGGAAATAATAAGTGTGTGTGTGTGTGAAGAG |
Primers for UN08153 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GGTAGAATCGCTCCTCCTCC | 60.176 | 20 | CACACCAGATCCAAAACCCT | 59.82 | 20 | 236 | 3082 | 3317 |
| 2 | GGTAGAATCGCTCCTCCTCC | 60.176 | 20 | CCTCACTCACACCAGATCCA | 59.659 | 20 | 243 | 3082 | 3324 |
| 3 | AGAATCGCTCCTCCTCCTGT | 60.358 | 20 | CACACCAGATCCAAAACCCT | 59.82 | 20 | 233 | 3085 | 3317 |