Simple sequence repeat (SSR)
| >UN07376 TTAAAGTATCTGTATGAAGGGAATGATATGAAGCATACTTGAAGAATGAGTTGGTGTCGAAAATTAAACCAATTAAGAACTTTGGCTAGTTACA GCTTAGGACAGCTCAGCATTTCCTGAATTTGGATAAAAGCAATAGCATGTGAGGATCTCTTTGTAGTTGCCCCATACTAGTTATTTATGACACC AGCCTAATATTGTTCACAACCCCACGTGTTCATGACCTTCCTTCCCTGTTTCCTGCCGATATCTTTTGCATGAGAACTTGTTGAGGCTGGTTTA GTTGTTTAGGTGGTCAATGGGAAATTCGCTTGCGTTTGCTAGAGATTGAAAAGAACTTTTGAGCCCAAGATTTCTTCTTTTTGACTGGTTGAAC CTTCTCATCCTTTTTCTCATGGAGTTCCTTCAAGTACTGGACAACAGCCTGAGCGCCTTTGTCAAGAACATCACGTGGTGGTCCTTCCAAAGGG TTCCCTTCAGTTCTCAAGACTCGTAACTTTGATAGCATCCTAAACGAATCCGGAAGGTTTCTTATTTGGTTGTTACTCATATCCAACTCTTCCA AATTCTCAAGGTTCCCAATGGACCTCGGCAAGTACCTTAAGTCAGCAAAGTTGTTGCTGATGTTGATTTTCACAAGTGAAGTAGCAAAACATAA GCTCTCAGGCACTGAATCGAGTTCATTGAAACTTACATTAAGCTCCCTCAAACATGTCAGTGATGACATAGTTGTCGGCAACCTGCCAATGTTA TTGTAACGAACAGATAGAACTTCTAATGCCTCAAGTTTCCCTACAGCTTCTGGTAACGCTTTAAGTTTGTTGTAGTCTGCAAGAAGCTCTTTGA GTGATACACACTGACCAATAACATGTGGGATCTCTTCGATATCATTAGTCTCAATATTGAGTTTTTGCAAATTAACAAGTGAACCAATTGACTC AGGAAGCACTGAAAGACTATTTGAGGCCAAATCAAGCTCTTGAAGACGGATCAATCTACTCAAGGTAGCAGGAAGAGAAGTCAACTGATTTGCC CGTAGATCAAGAAAAACCAAACTGAGAAGATCCCCTATAGAATCTGGGAGTTCAATAATCCTATTAGAATGCAGATCTAGTTTTGTCAACGATG AAAGACCTGAGATGGAGGATGGTAATGTAACAAGCCTATTTTCCGAAAGATCCAATGTGATTAAAGTGGATAACTTCCCTATTGAATCGGGAAG CCATTCAATTTGTTCCATCAGTTTATTTCGAAGATTGAGATCTTTCGTTCCTTTCTTTGATGACACTTCTATCAAACTAGCAACCTTCATAAGA TTCATTTTTGCATCATCTTGGCCAGAAGCGATGGCAGGTTTTAGAGTAGAATCCACGATCTTCGGCCTCATAACATCACTTGGCTGAAAGCCTG ATCTTATTCCATCGCCATTAAATATCGACTTAGACTTGCTCACATAAGTATCATCTCTCGTAAACATCTCCGCGCTTTTACCAGTCTCTTTCTC ATAAAACAACCCGGAACTCGGCTTGGCAACCAAACTCACCGCACTAGGCGCAGCATAACTAAAAGCACTACTACTACTACTCGTCGACGCAACC GACTTCCCACCACCATTCTCCTTACCACCACCAATCACACAACTCGACGCCCTCTGAATCATTTCATCAAACACCTGATGCACATTCTCCAACT CCAACAACTTAATCGCCTCCCTCTTCTGTTCTTCAGTCTGAAACCGAACAAAACTCTTTTGCATCTCCAACAACACCATGAACAACTCATCTGG AACATCTTTTCGCTTCTTTTGCCTATTTATAGACTCAAATTTCACTTGTTCTTCGACTTCTAAGTTCCGAATCAGTATTTTCGCACCTTCTACG TCATCGATTTCGGGGCGTGTTGGTAGTGACCTATGAATTCTCATTATCTCTTCCAATACCTCATCTACTGATTTACCAGAATCCATTTTTTCGC ACTAATAACACAGAATT |
Primers for UN07376 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTGGCTGAAAGCCTGATCTT | 59.955 | 20 | ATGAAATGATTCAGAGGGCG | 60.036 | 20 | 270 | 1396 | 1665 |
| 2 | ACCAAACTCACCGCACTAGG | 60.171 | 20 | CATGGTGTTGTTGGAGATGC | 59.967 | 20 | 240 | 1533 | 1772 |
| 3 | ACCAAACTCACCGCACTAGG | 60.171 | 20 | ATGAAATGATTCAGAGGGCG | 60.036 | 20 | 133 | 1533 | 1665 |