Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN06928
GCAGCCAGAACACTTTGTTCAATATTTGTGCTAATCCCTTTGTAAAAGCAATGGAGCCCTTTGTAGCGTATCATCTTTAGAATTTCATCCAGTG
TCCATGAAGGAAAACAGGATTTGTGTGAATATGCGATCTTTGTGGGAGGTAAGTAACGTTTGCATATTTCATAATCACATTTACCTTCGTACTG
ATGTTTTTTGTCTAACCCCATAGCTTGTCTTGACTTTACAACTAAAAGAGGATAAGTCACCACTGTAGCCCCAAGTTTTGCCAACGCCCCAAGC
AAAAATATCTCTAACGCAGTTACACCTTTGTTACTGTTGCTTAAGGCACGACGCTGCTTCAACTTCTTTAGTAGGGTCTCATATAGCATAAACT
GTATCGAAGGATTGCTAACCATAACCAATGTCGGGAAGACGCCTTTCCAGAATCCCAAGATTCCAGCTTCACCAAAGACTTCTTGAACCGCATT
GCTAGTTGCAAATGGAGGTGGTTCTAGTCCACTAACAATCAGATCGGTTGGAGATTTCTTCGTGTGGGTCTGCATACGAGTAACAACTACCCAT
ATAGGATTTGTCAGCAGCACGTTGACACACCCAGACATTGCAGCCACCATGAGTGATGAAAGCATCCCAACCGATCCATCTCCAGCTCCTTCTT
TCTTACGTCTTAGTGCAGTAGCTTCAGCTTTGCTCCTGAATATTTGATAGAAATAATAGTAAACACCCTGCGAACACGCGGTCCCAACCAACGA
AGGCGCCAATCCGCTATATAACCGGCCCCAGCCTTCTTGCTGAACAACCTGTAACATCTGTTCAACAGTCCCCGCCTTATTCTTCTTTTTCTTC
GGATCTCTATCAGTTTGCTGACGTGTATTAACCTATCATCAAATAAACTTATTATTATTATTAGTAAAAAAATTAGTACGAAATGAGGGTTAAA
ATT

Primers for UN06928 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TCCCCGCCTTATTCTTCTTT 60.03420TTTAACCCTCATTTCGTACTAATTTTT 59.00327120 821940
2TCCCCGCCTTATTCTTCTTT 60.03420TTTTAACCCTCATTTCGTACTAATTTT 59.00327121 821941
3ACAGTCCCCGCCTTATTCTT 59.96220TTTAACCCTCATTTCGTACTAATTTTT 59.00327124 817940