Simple sequence repeat (SSR)
| >UN06842 GTTCTGATTAATCCATAAATCCCAAGTCGCCAATCATAATGGAATCGAGTAAGATAAGCTCTAACAATAATTACTAGTTTGCATATGTACAACT CAAAACTAACACTACTGTTGCTAGTTTATCTACAGACTGCATGCCTCTAGTCTTGCTAAAATTAAAACCACGGGTGCCAAGTTGGATCCATCAT GCATAAGTTTCTTGGCAAAAGGGCAGCTTCGACAAGTTCGGTCACACCTCTTTGCACCGACTGTGGTGGATCCACTGAATTCTCCTCCTCCTCT GTTATGAACTGAGGTGCAATACCATTGATTCGGCCAATAACTTGCTCCACGTTTGTGGTGATTTTTTGTCTGAACTCAACAGGGTTCAAGCTAC CCCCACCAACAACCGGGGCCAATGGCATTCCAAGAGGTCTTCTCCATGACCATGATAAAAGTTCATCACGGAAAAACATAGCTAGATGATGCCA CAGATGTTGACTTTGCTTGGGGGAAACAACAGCTTGTGCTGCTGCACTCATGGAAGACACAATGAGGCCTTCAACACCAAAATGAGAGAAAAAA GCCTGCAAATTTCTAGTAAGTCTGAATGGCACTGGTTCATTGAACTCGATCATACCATTGGCATCATAAGCCGGATGGAAATCTGTTTGAAATA TTTTCCCCGTGTTCTTGGCAAACAGTATTTTGTTGGGAGACCTTCCACCAATTTGTAGCATGAAAGATGTGAAACTTGAGAGTGCCAGCTGGAT GGCAAACTGCTTCTTGAAAGCCCACATATGATTTCCACTCAGCAATGTTTTGTACATGTACTGAGAGAATATATTATCATAGACATAATCTTTT GTAATGTGGTTGTAAGCTTGGAGACGAAGATCTACTACGGCTTCTGGTGATATTTGGCCTGATATTGCTTGGTTCAGCTGCTCCTTAAAGTAGG CAATGGGTTGGTCGGCTTCTTTATTGTTTCTTGAACAATGGTTTTCGTATACCTCCAAAAAGGTACTGTATGTCAAGTCATCTTCTACCATTCG CACCTGAGACCAAACAGGTATGATAATTGGGGTGTGAATGTTTATGTGGCGTCGCCTTGACTCCTTGTGTTTATCAAACATGCGGTTCATCACA CGGAAAAGCTGTAATATCCGTTCATCACTCCTGGCATTTGGGGTCAAAGATGTTTGTACAATAAAATGACGTTGGGACCCATCAGAACCAATGA GAGTCAAACGACGGTAACTGCTTCCGTGCCTGCGCACAATCGGAATATCAGCCCCTACCCTGTCTAACTTGATAGTATGATCAGGTGCAACTTC TTGATCAGTGAAGTATTGTCCTGGAACCTCGACCTCAACCACATGGAAATCACGCAGCACTTGGCTTTCTTCCTCAAGTTTCAAAACACTAACT TGTCCCGACCCCTTATCACTTAAATTCACACGGCCGATAAGGTTAGTAGATTGACCAATAGGAATCTGGGACTGAGCATTCCACCCAAGCGCAA GATCTCCATGCCAATCCATAACTGACAGTCCAATGGTTGACAAAAATCGACCCAAAGGAAAATCCTTATCTCTTAACGTAGCCTCCAAGCTGCC TCCATAAGCCACATCACCACGACCAATAACCGCCCCTCCTGCCACCACCAACTCTCCTCGTTTATTAATCATTAACTTGTCCTCGAACTTCACA CCACCTGTTAACGTGTCACCAAAGTAAGTAGCCGAAATACCAGCCGATGCTTTGTTTTTCCTGTAATTAATGAACCGAGTTTCGCTACGTAGAG AATAAGACATTTCTTTTCCAACAGTTTGCATATCAAAAGCTACAGTCGTTGATTTGGATTTCCCATGTTTCATTGCACTTGATACCTCCATTTG TAGATTAGCATCTTTTTTATCTTTTGTAACCTGACCAGAAAATGACACGGGTATCTTTTCTTTGAGTGCAAGCAAGTGTTCCACGTTAATTCCT TCATAACCAACATCATGGTCCCAACCGTGTGGATCGAGGACTGGTCTAATGAGCCACTGGTTAGCAGATTCCAGAGCTCTATACCGGTGGGTAG GATTATCTGCATCAAATGAAGCAGGTAAAGTCATATCCTGAACGGCAACAGGAACTGTTGCAGCAGCATTACTGTCTTCTTCTACATTATTATC AGTAAGTTCAGTCGGGAAATTCTTAGCTGCTTCTGCCATTTTCTTCATCATCTTCCTTCGTTTCTTTTCTTCCTTCAACTGTTTCTTCATGAAA AGCTTCTCTCTGTATTCCAATTCATCATAATACGACTTCTTCTGTGCCTTACTAAGTTTTGACACTTGGGCATTAGTCAACCGTTTAAATGGTG GCAATTCATCATATTCTGACGATTCTTCATCCGATGACTCATCCATGTCGTCATCTAACGCGTCATCATCATCATCACCAAACTGCTCTTGAGG CATCTTCAGCTGAGGTCTTGATTGTAGAAGAGTTGACAGAATGTAAGGTAAAGGTGGTGCTCGACTTCTGGCTGCAAACGGCTTTCCAGGTGGC GAGTCTTGCAGCTTTAGAAGCATATTAGCCTCAACCAAGATCTTTGAAGCAAACGAAAGTAGTAACAAGTGAGGCTTCCACACTTGACCATTTG GTAAAACTCTT |
Primers for UN06842 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ACTTGGGCATTAGTCAACCG | 59.993 | 20 | TCGAGCACCACCTTTACCTT | 59.734 | 20 | 189 | 2320 | 2508 |
| 2 | CTTGGGCATTAGTCAACCGT | 59.993 | 20 | TCGAGCACCACCTTTACCTT | 59.734 | 20 | 188 | 2321 | 2508 |
| 3 | CTTGGGCATTAGTCAACCGT | 59.993 | 20 | CTAAAGCTGCAAGACTCGCC | 60.292 | 20 | 235 | 2321 | 2555 |