Simple sequence repeat (SSR)
>UN06304 CCGGTACCTACTTAATAAACATGTGGTGCAGACTTAATCGTATGTATTAAGTCAAAATTAAAGTACAAATTTGCCAAAGAGAAGATGATTTAAA GCATTTAAAAAAGTTATGACATAAGAAAACTACAGTACATTTGTGCTTCCTTCATTACTGGTATCCTTGCACGCCATGTGTTCACCTCCAGAAA CATTAATTAGGACTTAAAACCCTGAAGAGTGGTTTTTTCCAAAGCAAAAAAGGCGAGAAAACAATAACTCTTGAAGAACACAAACTTTGACATC AAAGCAGACGTTGCTTTCCCGTTACTGAATCAACAGTCGATTTGTTTCCAGGACCAATAGCAAGAACCGTTCTTGACCCTGCCGATACCTGGGT GCGTCCCGCATCAGCTACAACATAAGTTGGAAGGCCGATTCCCTCAGCCACTTCCTGCAGCTTATTCCTATGATTGTATGATCAATACAAGGAC TAGTTGGAAAATGTTCTGAATAACATGTAGAGGTTGCATCAGATCACCTGCTTACATTTCTTGTTGATTTTTACAAGTGACAACTATTTTCGCC TGCCCGCTATGCTCCCACCGATGCAAAAGATTCCGATGGCTTTGCATTAGCCTAGAATATAATCCAGTGGCAGCATGAGCACATTGAGAAGCAA TCTTTCCTTGCCCCATCTTCAAGTCTTGTCTAACAACGAGAACCATTTTAAGATCATCATCATCAGCAGCAGAAGGAGTAGTAGTAGTAGTGGT CTTTTTCCTTGTAGAGTTTGTTGATGAGAAGATGGGTTTTGATAAATCGAATAAGATACCGAATACGAAACCGATGACAAGTCCAGGGATGAAA TTCTCCGCCTTAAAACTCCCACCAAACAACCATCCTCCTTCTCTCTCTACTTTCTTCAAATGAACCCCCCGCCATTTTCCTTTTCTTTATTATC TCCCAGGAGAGG |
Primers for UN06304 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATCTTTCCTTGCCCCATCTT | 59.903 | 20 | GGACTTGTCATCGGTTTCGT | 59.973 | 20 | 179 | 658 | 836 |
2 | AATCTTTCCTTGCCCCATCT | 59.903 | 20 | GGACTTGTCATCGGTTTCGT | 59.973 | 20 | 180 | 657 | 836 |
3 | ATCTTTCCTTGCCCCATCTT | 59.903 | 20 | CCTGGACTTGTCATCGGTTT | 59.966 | 20 | 182 | 658 | 839 |