Simple sequence repeat (SSR)
>UN05495 GCATCATCAGATATGTCAACATCTATGAACAGAACACCAGGAATGATCTCTGCTTTTCCTTCCTCTCGCCACTCTGCAACTTTTGTATCGATCT GTTCCCTCAATTCAGCTCGTATTTCTCCGGTGTCACCAGTGAAAAGAGCAAGAAAACCCTGTGTTCTGCTATTGATAACATCAATTTCATGAAG AGTAACACAATGCACAACCTCTTTCCGTTTCTGCAACTCCCCATCCGGACACTGAACAAACTTAGTCTGCGGCCCCATTGCATCATAATCCCTA GACCTAGAAAACGACCTCCCGAGTTTAGTAATCTTCCCAGACGCCTTATCAATAGCGATCACATCGCCGCTCTGCACCTTATCCTTACCCAAAG CCTCAATCATCTTAGCACCAAGGTCATAAACAGTCTCCATCTCAGTAGTCTTCAAACTCAGCTTCCCGGTTTTCGACGCAGCTCCAGAAACCGC AGGGCGGTCAATCTGAATCTCGACAACTTCGCCTTCGATAACCTCAGTCTCCTCCTTAATCCTAACACCAATAGCCTTCCTAAAAGCCTGCATA AGCGCCTCGGTTTTGGACATCTCTAGCGAATAGAGCTCGCTGCCCGCAAGCATTGCGAAAGGCGTCTCGAGGCCGATGGACTTGGCCATACCCA TTGCGATAGCGGTCTTGCCGGTGCCCGGCTGCCCGGCTAGTAAAACAGCCCTGCCCGCGATTTTGGCTTCTTTGACCATCTGGACGATGACTCC GGCGGCTTTGCGGGCTTGGGTTTGGCCCACCATGCCTTCGGAGACGGCGCGTGGCTCTAGGGATGAGTCGAGGCCCAGGCCTCGGATGTGGGAG TGGGCCCCGATGCGTTCGATGCGGGTCAGGTCTGATGATGATGATGATGATGACACTTTTACTTCCACCATTTTTGTTTGTTTGGTTGGTTGGT TGCTAACAACGGCTGAGAAAGAAGAAGGAGAATGTTTTAATGTTAGTGT |
Primers for UN05495 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTGACCATCTGGACGATGA | 60.048 | 20 | TGTTAGCAACCAACCAACCA | 60.004 | 20 | 220 | 729 | 948 |
2 | ACCATCTGGACGATGACTCC | 59.928 | 20 | TGTTAGCAACCAACCAACCA | 60.004 | 20 | 216 | 733 | 948 |
3 | CTGCCCGGCTAGTAAAACAG | 59.898 | 20 | TGTTAGCAACCAACCAACCA | 60.004 | 20 | 262 | 687 | 948 |