Simple sequence repeat (SSR)
| >UN94436 TTTTATATAAATAAACATCACACCTTTATTTAATATTATTGTTGATGAAACATCATAACTGATGAAAGAATGATGGTAATACAAGCTGCAAAAC CTTTTAGTCCTCTACTGCACATCTTCAGTTCAACCTTACGAAGGCTAAAATGGAATAGTAGTACATTATGCAAATATACACACAAAGCCTGTTG CTTAAAACACGGCTTATAATTTATTCATCCTCGTCGCCGAGTAATGCAAAGGAGAAGGGATGGAACTTGTAACCGTCTCCCTCATAGAACTTGT TTTGGAACTCAACCCAGTGAAGTCTTAATGCGTGTAGAAAGGCACTCAAAGTTTCCATTACTAGTAATACACCAACCGTGGCAAATATAAACAC GATGATGCCAATGATAAGGATGAATACATTATTGTACCCCCAAGCAAGAAGAAGAACCTTCTCATAAAACACGGTTGACAACTCCGAATGTGCC AAGCTGAGTGCCCATAAACGAAGGTATGAAGCTGTATTTGATACTGCCCCAAGTACAAACTCTATTGTATGGATGAGTTGATGAACAAATACTT CACTGAACTCAAATTCCTCATGACCGTGAGAATCATGAGCTGCCTCCACCTGCAAGGATTCATCTTCGCCCTCAAGGGGTGTGTAAGACTGACC TTGGTGTGTCCTGTTATGTTGTGCCTTCAAAATGAAAGGCTTGGGTAGTAGCATCCATGGGACAGCAATTAGAGAGAGCAATAGAAGCACAAGC TGAACAGTCTTCTGGTGTGGAAAAAGCTGGTTGTCACCGAGATCATCAGTGGGGCTAAGGAACATGTATATCATCACATGGTATAGATCAGCTT GTGAACCCGTGACCCACTTCAGAATGATAAGGAGGGAAAGGTATCCAAACAGACCATTCAAAAAGATCATCTGTGGAATAAATTGGAACCAAAC ATTCACAGGATTCTTGAAGTACAGAGCATTGAAAAAGCTCAGTATTATTCCAAGGTTCATTTGTGCTACTCCAATAAGAATCGACATTTTCATC TTCAAAGAGTTAAGGAAGGGCAATTCACTGCGACTCCCATGCCACGCAGGGTCCACACCAAATGGGTATGTATCACGCGCCTTTATCAACCCTA TAGTGGTTGCCTCACTGCATCCAGCATCACGGCAGACATATGCTGAAGGACTAAATAACTCGAATGGAACCGAGAAGAACTCATTGTAGATCAA ACCAGTATAGATTGAGAAAAGGGACATCAACAATATAACATATCGACCCCCAAAGGTCATTTCCATTATGTCTCCAAGCTTCTGATTAGCGTAT TTCTTCTCCCTGGATATCAAAAATATAGTTGCCAGCAGGATGCATATACCGTGGCCCCAATCACCAAACATGACAGCAAACAGAAATGGGAATG TGACGATAGTATATACACCAGGATTTGCTTCTTGGTACTTGGCAACCCCATATGCATCAACGATTGTTTGAAAGGAATCAGTAAACTTGTTTGT CCGGAAATACGTTGGAGGCAACTCTTTAGTGTTCAAAACCTGGAATATAGCACCAACTTGTGAGTTTGAGTCTCTTGTTGCCCGCTCCAGTGCA TCTTGAATCTGTTCTGTCGCGTAAACGGGACTCCACCCTTCAGCCACAAGACACTTCTTTGTCACATCGATGCTGAGCATATTCAGAGTGTGAT AAATAGACTTCTCTTTACGAACCAGAAGGTTCCACCGCTCATATTTTTCTCCTATTATTTGTAGCAAATTGCCACGGTGCAGAAGGCCAGCATC TATTGTTGTCTTTAGCTCAGATGTCCTTCCAGATACCTCAGTTATCGTTTGTTCTTGTTTGCTAAGTTCCTCTGCAAAAGGGTAACGATTTGCT CCAAAAGCTTCGCATATCTTTAGAATTTTGCTCTTGGCTCTTTCTCCGGAAAAGAAAACCACAAAAACATTTTTCTCAACCTTTTCTCCTGAAG TAGGATCAATAACAGCTTCATCCACAGACGACTGCCTCAGAAAGACATTTCCTCTTGTAGCACGGAATAAAATCCTTTCAAAAGCCAAGGCTCT GCCTTTGGGCACAAGGCCAGTGAGAAACCCCAACTTGACTTGTTTGCTTTGGTCAGTTATATCCTGATCCTTCAATAGAGGAGTTTCCAAAGAT TCTTCAGCGGCCTGCTGTGATGAAGCTTCGCTGTGCTGAGCTGCAGCAATGCTTTGTGCCGCTTTGAAAAACTCTCCGGCCTTTTGCAGAACAA GCTTGTATTCTACAAGCTCATTATAGCCACGCTGCAACTTGTCACTATTTGCATTGATTTCAGTTAGCTCGGCTTCAAGATCTCCAAGAGTTAC CTCAACATCATCCAGATTAAAGTCAGCTTTGGCATCAGCCTTCGCTGATGGTTTGACACCCGCCTTTGACATTTGATCTTTAAAGAAGCGCAAC TTACGTGCCAGTTCCGCGCATCTTTTAATCTGTCCTGCATATGTTCGCTGGAAAGGGCTTTTATCTGCATTCAGATCTTTGAATTGAACGAGAC CAATGTCACCGAGATAAGAAGCGGTGAAATGAGCAGACTCGATAGGAATAATGATTTGAACTAAATGCATCGCTTCTGAGCGGAATAGATCCAT GGAAGGACAGCATCCTTGCTGTTGCTGCTCACCCGCCATCTCTCCTCGGTTCAATCAGTGTGTGTGTGTGTCTTTGTGTCAGATACTAGACTCT TCTTATCCCTGTTTTTTTTTGG |
Primers for UN94436 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATCCATGGAAGGACAGCATC | 59.893 | 20 | CAGGGATAAGAAGAGTCTAGTATCTGA | 57.913 | 27 | 111 | 2627 | 2737 |
| 2 | GATCCATGGAAGGACAGCAT | 59.893 | 20 | CAGGGATAAGAAGAGTCTAGTATCTGA | 57.913 | 27 | 112 | 2626 | 2737 |
| 3 | GTCACCGAGATAAGAAGCGG | 59.836 | 20 | CAGGGATAAGAAGAGTCTAGTATCTGA | 57.913 | 27 | 195 | 2543 | 2737 |