Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN05385
CCTTCTCAATTTCGCCTAATTTCAAGATCTACCTATACGAATAAACAGGTTGGTCTCTAGTCAAAACTTAGTAGTTAGTATCACATAGTTTAAG
GCCGATCTAATCTGCAATAACACTTTATACATTTTAAATGACCAATTTATATCATTAACAGGTCTTGTGATCCTTATACTATGTACAAGTTCGT
CTCTATCTCCGTAAATTCAGTCAATAGTTAGCAGCAGATATTTTAAGCTAATCGGATCTACAATAACACTTTACGCGATTTAACCGAAATCAAA
GTCACAATTTCATCAAATAAGTCACCAAATCTCGTAAAAATCAACGCAATCACACACATAAACTCTAACAACAAAACAAAAGAAAAACAACCTC
TTGATCTCCAATGACCGTAAACGCTTTAACGAAAAAGTAGACAACCAACAACTTCTCCTCGACCGTTTTCTCAACAACTTCACGAATAACGTTC
ACAGATTCACGTCTCATGAGCTCAACCAAACTCTTCCGTACATCTAACATCGATTCACATCACGGGATCAAAACTGATTCGAGTAGACGCAACA
TTCCTTCATCAAATCTTTAGATAGTGATATTCCATTGTATTGCGTTATTTTTGATCAATTTGATATGAAAAGCGGTTAGGGTTTCAATATGGTG
GTTAGTGTGTGAAAGGAGTGTGTGTGTGTAACCTGTGAATTGTAAGAGTAGTGTGTGTTGTTTGGG

Primers for UN05385 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1CGTCTCATGAGCTCAACCAA 59.98420CCCAAACAACACACACTACTCTT 58.22623245 480724
2ACGGGATCAAAACTGATTCG 59.93320CCCAAACAACACACACTACTCTT 58.22623193 532724
3CGCAACATTCCTTCATCAAA 59.66420CCCAAACAACACACACTACTCTT 58.22623167 558724