Simple sequence repeat (SSR)
| >UN00440 CTCCAAGTACTTTGGATTGACATGTATACCATGAGCAGGTCTCGGAGATTCTGAAGCTTTTATACCAGAAGATGGGTAACTTGACGACGGGGAA AACTGTAGTTCAGTTTCAATTTTGCGAAGGACAGGTGACGGGAATACAGTTGACCAGGTACCAAAAAGATGGCGCATAGAAGGATGCATATTTG GGTGGACTTGCCTATATGCCAAACAATATACCTCAGGCAAGCGAGCAGAAAAATGCCTCACGTAGTCTTTACCAATATTCTTGACAATACTATC CAGAAGATATAAAGAAGGAAGTTTATGTTCAACTGGAACCTCGATAATTCGGGCACAAATAGCATCAGCAATACCCGCGCCATGTATCCGCTGC TCGCCCGCGATAATCGTCAAGTCCGTAATAATCGGTTTCGAATTAATAACCAATTCACTCAACACAGCTTCGTAAACCTCCACAACCTCATCAG TACTCAATGCCACGTCATCATCGTCATCTTCCCCCACACGTTCTTTTAACAAGGCTTTGAATCGATCAACGATTGGAGTTAGTGATTTGGTGGT GTCGGATTGTGGCTGTGGTGGTGGTGGTGGTCTGTATCGGTTTTGTGTTAGGTAGCTTGTGCCGTCCATGAATTGGATTGGGTTGGATTTGGGG GGGAAATTAGGGTTTTGATTGATTAATGAAGCATTGTGTGTTTTGG |
Primers for UN00440 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CTCAATGCCACGTCATCATC | 60.08 | 20 | TCAAAACCCTAATTTCCCCC | 59.992 | 20 | 204 | 473 | 676 |
| 2 | CTCAATGCCACGTCATCATC | 60.08 | 20 | ATCCAACCCAATCCAATTCA | 59.991 | 20 | 180 | 473 | 652 |
| 3 | CTCAATGCCACGTCATCATC | 60.08 | 20 | TCCAACCCAATCCAATTCAT | 59.991 | 20 | 179 | 473 | 651 |