Simple sequence repeat (SSR)
| >UN90345 CGTGTTTTGTGTCGGGTCCACTCGGATCTTCTGATGCTTCTACAAACGACTCTTTTCGAACTGTGCTAGATGTGCTTTCGACCAATGCTTTTCT GTAGGATCGTTGTAAATGCTAACTCTTTTCTGTAGATGTGCGAACTGTGTTAGATGTGCTTTCGACCAACGATTTGTAGCTACATTTACAAATC TGAAAAACGCATTCATATGCTTTCAGGAACATCAGTTCATTTACATCCAGTCAAGCATACTACATGTTCAGCTAACCATGGTATCAGCCTTCTC AACAGCATTATCTCATATATCCGCAACACTATTCTCCGGCGCTTGGGCATTTTGACATCAGATACATGTCATGATTTGAGTTGTGGCCCAAACC AAGTTCCTTAGCTTAAAGGTGGATGGGTTCTTGTATATTGTTGTAGGCCTGCAACGTGCATCCTTCAGTTTCCTGCGCTTGTGTGCCTTCACAA TCATTCTTGCATCTCCATGTCCTGAACGCGCATTTTGGCTGCCAAAATTGTTTGACGTTCAAAAAGTTCTGCAACACTACGTGACATTGGTTCA ACCACTGCACGCAGACCCTGCAATTGGGGCAATGCATTCCCCATATATGACAATTCACATCCCATGAAAGGCACCATAACCATTTTTTTCCTTC AAAAGCCGCCACTTCCTCTGAGCCTCCAAGTTAATTTGACCATCTTCACTTAGTCCATTCTTGTGCCATTCATAAGGCTCCTCTGCTAGAAACT TTCCAGCCTGGTTACTTGCTGTTAAGTAATCAGTCTTCAGAATCCACCTGCGTTTGTCAATTAAATTCTAAAACTTAATATTTTGAGCTATTAT ATATCCTAATTTTCAAGTTAGCGGTGTCATTAAACGTCTAAATAACAGTTCACAAAAGAAAAATGTATAACACAAATGTAGTTTAAATGTGAGG TTTTAATTTTATAGTACCTTCCAGACGCAGCAACAGCAAAAAAAGGTCTCAGTTCTTTTAATGGGATCTGGGACAATGAAATGAGTTACCTGGT AAGACCACTGGTGAGAAACTTTGCAAACCCTTCCTTTCAGTCGCCGGATGAGGTGTTGAAACTCCCTTCTTTGCAACGAATGTCCAGTGAATAT AACGAACTCCCAGACGCACTCTTCACAATCCGAACCACTTTTTATAAATTGCTTATTTTGAGTGCCAATCATCTTAATAATTTTAAGAATGACG CGTGCGCACCCACTGATCTGTGGTAAAATCGAAGTTTATTGACACTCTGAAATACGCCTGACGTGTGGGTTGATAGAGCTTCATGTAATGGCAA GTGACAAAGAACCAGTAGAATGCCGTGAAGGACAGCAGTGTGCTCTTCGATTGCTGCCTAGGTCAACCATGAAGCTGTTCAGCCAATCCCGTAT AGTCGACCGTAAACAAACGCGCAACAAAGCAGGTTGCTGCCTACCTAGCCATATGACTCGGAATCGTAAAATGTTGCAACCTTCCTTCTTGCTC AGTTATATACCCTTAACAGTCCAGAAGCTTTTTTCTTCCATGATGATAAAAATCAGAAATTGAAATAGGCTAACAACAGCAGATCATGAGGTTT AATTTGAAGAGTGTATTACTTCATTGCGCCCTCTCTCCAGCCTTAGGTGGTCCACCATAAGGAGTAGCTTTATGAGCACCACGGTTATTATTAA AGCTGCTAGTACGTTCTGGAGCAGATCAACTGCCACCATGACGTTTGCCGCCTTCACCGCCGGTGGAAATTTTATTGTTTTTGATGAGGACTTC AAGTGACATGTCTAAAGATGCACCGGCCATTGTGATTAGTGGAATAAGGGTTTGTTCGGTTAGTGGATGAAGGCGGTGGAACTCGAAGAAGATC TGGAAACTGATGTCGGTCAAGAGGTAATGACTAAAGAAAGGAACAGGTGAGAACTGAGAAGTGTGTGTGTGTGGTGGATTCTAGAGAATAACTG AAGGGGGTGAAAATATGGACTCGGGCTTTGGATAATAAAGAATAAAACGGGCCA |
Primers for UN90345 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTCGGTTAGTGGATGAAGGC | 60.074 | 20 | ATTATCCAAAGCCCGAGTCC | 60.286 | 20 | 170 | 1841 | 2010 |
| 2 | TGGAAACTGATGTCGGTCAA | 60.088 | 20 | ATTATCCAAAGCCCGAGTCC | 60.286 | 20 | 130 | 1881 | 2010 |
| 3 | ATGTCTAAAGATGCACCGGC | 60.103 | 20 | ATTATCCAAAGCCCGAGTCC | 60.286 | 20 | 217 | 1794 | 2010 |