Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN05304
CGATACAGAAATTTAATAATTTGAATAATGTTACAGGTACGGATGCATAACTGAGGCAAAGAAGAAAAGTTTGATACTTTGATCAGTAGAAAAT
AAATAATTACCAATCAAAAAATACCAACTTATAAATAACCCTTCAAAACCGCACACCCCAAATGAATTTTATACATACACTGATACACACAAAC
AATAAATAAGGAAATCGCAAAAGCTTTTACACCTTTGACGCAATTGCTGACATGTCTCTGCTTGATCTGTTGTATTTCATATGGCTTTTAACCA
ACTGCCCGGCTGATATGGCAGACATCAACGACAGTTCACCAGCCAACACCGAACCAGCAACTATCCTTGCTAGCAACTGAGCGTTTGAGCCTGG
TGATTCTATGCACGCACCCTTGACTCCAAGTAGGTTCAAGCATGCTGCTTGTGACGCTAGTTGTGTCCCTCCTCCAACTGTGCCAACCTCTATT
GAAGGCATGGTAACGGATACATGCAGATCTTTTCCATTATTGACTGCTTCCATCATAGTTATGCAGTGAGAGCTCTCAATGTTTTGGGCCGGAT
CCTGACCAGTGGCTATAAAGACTGCAGATACGATATTTGCAGCATGTGCATTAAATCCACCAAGAGAACCAGCAATAGCTGAACCAGTAAGGTT
TTTAAGCATGTTAAGTTCTACAAGAGCAGGCACTGTGGTTTTAAGCACTTTTCTCACAACCTCTTCAGTGATTACTGCCTCGCACACAACAGAT
TTTCCACGCCCCTCAATCCAATTAACTGCAGCGGGTTTTTTATCCGAACAGAAATTTCCAGATATACCAATCACATCCATGTCTGGGAAATCAT
TTTGAAGAAAATCCAACACGTTTTGGACACCCTTTGACACCATGTTCATTCCCATTGCATCACCCGTGCTGCAAGTAAATCTGATATATAGATT
CTTTCCGGCAATTGAACATTGAATATTTTGGAGCCTAGCAAATCTGCTTGATTTATTGAAAACGACACTCAACGTGTCAAAATTCACCCCATCT
TCCAAATAAAACTTCAGCTGCGAAGCCCTCTCCGCAGTGGCAAACCTAACCACAGGCGCTCTAGTCATCCCATCTTTCAACAAAATCGCCGTCG
CCCCACCCGACAAACAAATCGCCTTACACCCTCTATTCGTACTAGCAACCAAACACCCTTCCGTAGTAGCCATAGGCACCATAAACTCCCCACC
ATTCAACAACAAAGGCCCCGCAACTCCAACCGGCACCTGCACATACCCTATAGGCATCTCACAACACTGCCCTAGTATACTCTCGTAATCAAAC
CCCTCAAACCCTAACCCTAAAACCTCCCTGCCCACAATCCTCTCAACCGCGCGTCTACGTATCTTAGCCGCTCTAAAACAATCGCCTAAACTCG
CCTCTAACGAATACGAATTCACCTCACCACTAACAACCCTTTTCACAACAACATCATCATCATCATCGGAACTGTTCTCATCAAATTCATCATC
ATAAACAAGTTGGCATTTATATAAATTAGTACTACTACTGTTATCGTTTTCGCGTGAAGGCGTAATAAACGACTGGACGAAATCGATACCGAAA
AAACCTAACAAATAAATAAACGAAGCGATAAGTAACACAATAGCGGATAATTCGGTTAGCGTGACGACGTGTAGCGGTGTTCCCGAACGGATCT
TGTCGCGCCATCTGTGAAGGAGGTAGTAGGCGACTGAGAAGAATAAGGTGAAGAAGAAGGTGTTGGTTAGGTATAATGGTAATGGTAATGCGTC
TGATGCTTTTGGGATTGGTGTTGGTGAATGTGAGCGGTGGTTTTTGGTGGTGGTTGTGGTTGTTGACGGTGGTTTTGGTGGTAGTTTGCGACGG
AGATCCATGGTGGGTGGGTTGAGGGGGAGGGGGGGAGATGTGTGTGTGTTATATTGATTGGAGTTTT

Primers for UN05304 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TCGCCTAAACTCGCCTCTAA 60.1120CGGTATCGATTTCGTCCAGT 59.95520198 13981595
2TCGCCTAAACTCGCCTCTAA 60.1120GCTACACGTCGTCACGCTAA 60.08120276 13981673
3TCGCCTAAACTCGCCTCTAA 60.1120TTTCGGTATCGATTTCGTCC 59.90120201 13981598