Simple sequence repeat (SSR)
| >UN89842 ATAGCTTATTTTCCTCGATAGCCTGTTGTACTGTCATGCCGTTAAGATAGCCCACAATGTGTTCTTCTTTGAGGGCGGACTCTTGTGGACCGTA TAGTTCAGGGTCAAGTTGACTCACTGGTGGGAAGACTTTAAGTTTCTCTATGCTGACGGGGTTGACCCCTGCAAGTGCTTGGCGAGCAAATTCA TCATCACGCAACCATGAGAATCTGTCCTTCGATAGAATTTTGGGAGTGTCATACTTGAGAAGGCCACCACCTTGGCTAGACTCATGTAGTCTCG TCACTAAATTTGGCAATCGAAGCTTCTTAATGAGATCATCTTGCAGGCCTAACTTGAGAAGGACGCCTTCACTATAGAGACTCTCAATTTGCGA GAACCCCTTGAAGTCGTGTTTTTTAGAAATACTGGCCACCATTGATGGCAAGAGATTATGTAGCACTGCCTTTAACCGACTTGTCGAGAATGTA TTTTGTTTTGACTCGTCAAATTGTTCATCTCGTGGAACATATAAAGGAAACGGTTTCTCCACTCGACTCTCAGCTGAAATATCAGTGTCACTAG GTGCGCGGCCAGTACGACACCTTCTTGGATATGGGATCTTTTGACCGCCTAGTAAAGGTCTAATAAAGTCATTTCCCCTATCAGGATTTCCAAG ATCATTATAAACGTCATAATCATAGATTCGGTCTGATAACTTCCTCACTCCTGTTCCATCACCCCGTAAATCTCGAAGCTCTCTCTCTCTAAGT AGTTTTATCCCGGCAGGAGTCTGATCTGGCAGATATGGCTGATTAGAGAAGAAAATCCTCGGTTCAGGATGATCATTAACAGATTGGACCCAAG AATTACAAGGGAAATAAACAGGACCACACGCAAATCCTTCGATAGTAATGCTCTCCAAATAAAACTCTTTTTGATGCTTATTAGTAATCGTAAT CGCTCCCGGGACCCCAAAGTCCGATTCCACTAATATATCAGATGTGTAGTTAACTTTTTCAGATTTGAGATTTGATTTTTGTGACCAGTCCTTT AATACACCTTCTTTGCTTTTCTTTGGAGCCCTTGTTTTTGAATCAATCTCAACACTAAAAAGCTCCAAAACAACATTCCTCCCAATCTGATCAG CAAAAGCATCAATCTTTTTCACAAGAGTCTCCTTAAAATCTTCTTGCACCTTATTCCTCACAGTCAAAACAGCTCTCACCTTAAAAGTTACTGC TTTTTCTTTATCTTTTTCACTTTTAACAAACTTAGCTATGTCTTCACTTATAGCAGACTTAACCACCACCTTAACAAACCTTTTCTGAAATGAC CCATTTAGAGATATGGATACATGGTTCTGATGCATGGGTTTGAGAGAGTTGGTAAAAGATGGTTGTTGTTTTTCTTGGAGTATGGAAGTGCCCA TGAGTTCTTTAGCTAGTGCCATTTTGAAGTGTGTGTTTGTGTCTGTTTTGTT |
Primers for UN89842 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGTTCCATCACCCCGTAAAT | 60.051 | 20 | TAGTGGAATCGGACTTTGGG | 59.926 | 20 | 263 | 710 | 972 |
| 2 | TGTTCCATCACCCCGTAAAT | 60.051 | 20 | ATGATCATCCTGAACCGAGG | 59.886 | 20 | 119 | 710 | 828 |
| 3 | TGTTCCATCACCCCGTAAAT | 60.051 | 20 | TTTGCGTGTGGTCCTGTTTA | 60.149 | 20 | 171 | 710 | 880 |