Simple sequence repeat (SSR)
| >UN00312 CACAGTTTCGCATGTACATATATTTTACTGGAGGGCCCGACACTGGTAGCTCATAGCTGCATAGTAACGGGTATGGTTAAGTTAGTATTAGATA TCCAACACACCGGCGATCCTTTGAAGGAAGAAATGAGTTATCGAATAACCTTGTTGACTGCCATGTATCTGACTATTATCTGCGGATGAACCGG ACTAATTTACCTGTGCATGATTGGTAACACCTGCAATTAATGGTTATATGTATTCACTACGACAACTGTCAGCTGTGACATGTGTTTGTCTATG GTATACTTACACCTTGAGTAACACATTCCACGTTTCTATAGCCAGAATCATTGAAAGATAAGGTCTTTTCGACATGTGCATATTCATTCGAGCA TGGATAGTAGTTGTATCAGCCAAAGGAAACTTCGGCGCTGAAATTGTATGAGTGATACATCTGTCGCTGTTATACAAATACCATATTTATTTTA GTCTACCCGTGGTTCCCGTCGATAGCTTCTGATATTATGCATACTCGAGTACTGAAGGTGCACACCAATCATTTTCCTGTAGAGTGGTCAAAAC GGTTGCTGTTTGTGTAGGCATACGTCTGCTGACCAAGCGCGTTCGTCTATTATTTTCATGTAATGTGGTGGGACGTGCTTCCCCGTGCGATGTT GCATGTAAAATGACGAACAACTACGGCCAAAGGCGTTGCACGACAATTATGGGCATGCAAAGCGCGACAAACACTTTCCAAATCTTTGACCCCG TGCGAACTGCTGCATATATTTTGCTTTGGTTCATTTATGCCTGATGTGCCACATCGTGAGATAATTCAGTCATTTTTATACTCATGAATGTCAT TTCAGCTCGTGCCTTAACATCTCTGAGCTGAGCTTCCTTGCTTCCATAATTTGAAGGAGGAATAATTTATAGCTACCTCTTGAGTTAGTCCTGG CATGACTTCATCCTCTTACTTGCCTCTTCAACCAATAAGATCGTCGCGGGAAATAAATTTAACAGACATGGAAAGACTTCACATCATAGATTTC TTAGATTCACTTTTGCGTCTAATAGGGTAAGCTGCAAAAATCATCAGCAAGGCAGCCTTTTGGTGATCTCTTGTTTTATGAAGAAGATTTGATG AGATATCGTATGTAAAACTGGTTCTTGAATCAGTGAAGTTACTCATCACATATGGGGTGTACCGGCCTTCTTGACCCCACCGGAATCCTACCTA CAACGTCGTTGCCAACGAAAAAATACGACGGAATTTGTTCGGTGTGTCGGAGTGTGTGTGTGTTTTTTTTGAGTATTTTGTTGGGAAGAAGATT CAAGAAGAAAATGGAAGGGGTGGATTTATTAGAGATGAGAGAAGCTTCAAGAGAGGAAGCAAAAGGCAACTGTTTAGTACAAATGAGTAAAAAA AAAATTGAAGAATCACATACCTCTCAGCAAGTGGGGTGTGT |
Primers for UN00312 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GCTGCAAAAATCATCAGCAA | 59.96 | 20 | AATCCACCCCTTCCATTTTC | 59.996 | 20 | 278 | 1065 | 1342 |
| 2 | ATACGACGGAATTTGTTCGG | 59.823 | 20 | CAGTTGCCTTTTGCTTCCTC | 59.993 | 20 | 144 | 1245 | 1388 |
| 3 | CAAAAATCATCAGCAAGGCA | 59.809 | 20 | AATCCACCCCTTCCATTTTC | 59.996 | 20 | 274 | 1069 | 1342 |