Simple sequence repeat (SSR)
| >UN84840 TGTGTTTGTTTTTCTAAAAAGAGGTCTTACCACTTAGAAGTTGGAAAGAGCCCAGGGGAACAGCACAACAAAATAGGGTCAGCAAATACACGTA ACCCCTTGACAACATACTGCTATGTACAACCACCATTCAATCTGTAGTCACAAAGACGTCTTCTAGACCAAGAGCTAAAAACGCACTCCATCTC TATAAGATAATATCCTCGTAAGACCTCACTTACATTGTAAGTCAACCTTGGCTAATCACTTTGTTATCGTTTTTGGCTTTAGTTTTGCCACGGT TGACCTTAAAGTCATTCAAGCTTCTGTAATCTTCTTTGAGTAGTCTATCCAATTCCGGGAGCTTTTTGTGATTCTTTGTCTTAGAATAGTGATG GAATGCCCAGTATTTTTCAAGACCATAAAGATCTCCCTTATTGTAGAAATCCAAAGTTAGCTGTTCAAAATCCCCGTAAACATCATCTCTAAAT TCCTTCTCCAAGCCGTAGCTATAAAATCTGAAAAGGCATTCCATTCCATAGTTGTAACCAGCAGTTGCATCTTCCAGTGCTATTTTCTTGAATT CATTATACATTGAAGGGACAAACAAGTCCCTAAGAAAATAAGACCAGAATCTGTAGAGAGTATTCATTTCCTCACTGCATCCGATGCCACATTT CTTCCGCTCATTTAAGCATCTCTTGTGATACTTTACATACTTTTGCTGCCTGAAACCATTTTCTTCTAGTAGCTGATGACTAGGGTGCTGGAAA GGCGGAAATGGCTTCGGCATTGACCCTACAGGCGGACTACCAACTGTAAAGCCGCTATGAGGAGAAGCACCCAGCTTTGAAGACCTTAATCCAT GATTATTATCAGGAGGTGTTGAACCAAAGAAAAACCCGACTGAAGAACTTGGAGGACTTTCTGATACACTTCCATTATTCTTAAGGTTGCTAGA AAACAAGCGCTGGTTCTTTAGCGATTGTTGCTTAAAGAATCCTTTATTTTGCTTCCTTCTAGAATTAGGACTGCCAGCTACTTGATTTGGTATG GAAGAAGACACTCTAGGAGATTTGGACGTCACATCCTTTATTTCAGTTGTTGGATTGTTTCTTCTACCTTTATTCCGCTTTGATTTTAGCTCCT GTTCATAGTAGTATAGACCATCATTAATGGCAGAAGCAAGCTCATTGGAAAATTTTGTTTCCTCTACTGAACCTTTAGTTCCGCGACCGCTTCT ATTATTTTGCGTAACAATCACAAGTCTTTCAACTGCTTGATCATTGACAACCATCTCATCATCTTCATCATCCATCCTTGTTTTAGAGGAAATA TCGTCCTTCTTGTGTTCAAGCTCAAGCTCTTCATCAAACATGAATGTGCTTCCAAAATCATCACAAACTTTGTCGATATCTTGTTTCGAGAATT TTGACTTATTTTCTGTGTTTGAATGATCTTCATGGGAAGTATCTTTCTTTAAAGATTCAATATCAACACCCTCTTCAGATTGTTTTGTAGAACG TTCTTCTATCATAGAAGATTTATTTCCCACAGAAGCTGGAATCCACTTTGACCAACCCTCACGCTTCCTCACCTTGTCACCCTGCACTTCTAGA GTACTAGAGCTCAGTAAAGCATCTACTATAAACGGTATATCTGTACTCATTCTTTTAACCCTTTTAAAGTCAGCAATAGTTGATATAGAAACCC ATCCGTGGTCATCCATCAAAGAAATCAAGTATTGATCGCTAAGCAGATTTTGATCACTGAAATAGTATTCAATTTGGCCTCTAAGACTAGCTTT CAGGGCTTGTGCCTGAGCAGGTAACATAGGAATCCCAGCACCCGGTGGATGTGGAACTACAAAAGGTGGATGTGGGACTCTAACAGAAAATGGA GGTATAGCAGGAAGATAGACAATAGAACCAGGCGGACCAGCAAAGGCAGGTCCAGGTAAAAATCCCGCAGGTGGACCAAAAAAGGGGGGCCTTG TAAAGGGTCTTGGCCCAGAATTTTGCTGCTGCACATCATTGTTCTCTTTCGGACCTAACGGTTTCTGATTATCCTGCACGTTAGGCCTTCTATT AGGAATTTCGACACCATAAGCATTTGGATTGCCTCCTGGAGGATATGGTGAAAGAGCGGGCGGGTAAGCATATCCATGCACAGGTATATGAGGG GGCCAAGGTGCCATGCCGCCATACACAGGTGGTTGATGAAAGGGTAATGGTCCATGAAAAGGTGGTGGAGCGTTTGGGTTAAGTTTATTGGCTG CTGCTTTGTGTTGGCGTGTTGATTGTCTAGAAGAAGAATTATGGTTTCCACGCCCATGTGGCTTTTGGGGCTCAGCAGTCACCTGATTAGTATT AGTATCAGTATTAGTGTTAGTGACAGCAAGAGTAGTATTAGTTGTTTTTAATGAAGAAAGTGCAGGCCAAGAATGTGAAGCAGAGTCATCATCT GGTGGTGGTGTAGTTGATGTCTTCCATGGTGATTTTGGCGGCGCCGCCACACCAACATCATCATCATCATTAGTTGAATGCTTGTTGTTATCAG GGTCACCCATAACCATATATTTTATGTAAACAGATTAGTATTATTATTAAGGTGTTTGTTGTTTGATTGTATGTGAGCAGAAGAAGAAGAAGAA GTTTAACAAGACAAGGGAATGAGGTGCGCCGTCATGTGTTTGTGTTTGTGTTTGTGT |
Primers for UN84840 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | AAGAAAGTGCAGGCCAAGAA | 59.993 | 20 | TGGTTATGGGTGACCCTGAT | 60.05 | 20 | 150 | 2404 | 2553 |
| 2 | TCATCATCTGGTGGTGGTGT | 59.801 | 20 | TGGTTATGGGTGACCCTGAT | 60.05 | 20 | 118 | 2436 | 2553 |
| 3 | GTCATCATCTGGTGGTGGTG | 59.801 | 20 | TGGTTATGGGTGACCCTGAT | 60.05 | 20 | 119 | 2435 | 2553 |