Simple sequence repeat (SSR)
| >UN04961 GGGAGTTTTACTGTTAATTAATAATATAAATCAATATTGGTGATTTTTCTTCTTCTTCTTCTTCTAAAGTTTCTAATTTCTGCTTTTATAATAA TAATAATAATAATAATTGCAACATTACAAATATAGCAGTAACAGGAATGTTTGGATTATTGAGTATTGATTGAGTACATAAATTGAACAGCACT CCACAGTATCCATCACCTCAAATAACTCTCATTAATTTCCATTTCAACATCAAGACCAGTGTATTTACACAAATGCCTAGCGTATGGGAATCTT CAGCTCTAAAAACAGGACCAACCACAAATACACGTTGAAAATCACCAGAGATTGCCATTTGCTTGTGAAGCTGAGGCGACTGTGCTAAACATGC TGGCTGATTTTTGTACTCAAAATTGAAAATAGCTGCTCCACCTTCGCTAGTGCCTGCAATTATCATTGGAGTGTCGATTTCGCAAAAACCTTTA CTCAGCAACAACTGCCCAAATAAATTTTTCACTTGGCCTTAAAGCGAAAAACCGCTTCCCTTGCTGGTGCTCGCATAGCCAAAACTATATTGTC CAAGAGTGTGTCCTGATTCACACGAACAACTTGTTTCCGTGGTTGCATGACAATTTCAAATAACCATTATAATATCCAAAATGGGTCAACTTTA CAAAAATTCAGTTTAAATGAATGACACTATACCTCCAAATTCTCAAATTCAACTTCACTTCTAGACGCATCCTCATAAGTAATATGACGCTTAG TAGCAGATCTGCTTATGCAATGAATCTTCCTCACAAGTACTTCAACCTGTCATTGATTGAAGCTCTTTGACAGGAATGTCACCATAGTTGGCAG CACTTAGGATCATGTTCTGCCATTGATTGAAGCTCTTTGACACCAAAACAGTTGTGTGTCATTCAAAAGAAACTTCTGCTTCCCATATGCGAGA GACCAATGCAACAGGAAACCAACAAAATGGAGCTCAAGCCGATGGGTTGGCTAATCAGAATATTTCAGTTCACCCATCACTATTAGCGCCACCG TCTTCACCCACATCTTTTACCAACTATGCACTTCAATCTACGGCCCAATCACTCTGTTTTCTATCAGCAAACTCACCTGGTGGTCCATCTAACA TAATGTTTGCCGCTCGGCCATACGCCCACGAAACCAACCTTGTATCTCCACCTGTATTCTCAACCTTCACCACCGAGCCATGAATGTCCCCAAA CATTAAAATGATTATGATCGATGCTTATGAAATCCTGCAACTTGAACTCCCGACAATCACAATCAGCAATGTGGTGGTGCACTCTTATATCATG AACAGTCTCCTTGCTCCTTGGTTTGAGCCCCCATCATGCTCCATATCACTTCTTTCTCAGCCCACCTCCAACCTAAGGTCCATCCGGGAGGCGA GACATGGCGGTATTGATGGAAATTATACATTGTAACGACTGCAACGTAGCCATCAGGGGTCCAACTAATGATATCCCACTTGATTGTGATGTTT CCATTTGGGTCAAGTGCATCATACGCTTCTGTGGAAGTAAAACTGAATGAAGAAAGCAATATAGCAACAACAATGGTGGAAAGTGACAATCTTG TTAAAGATCTGAAGCAGTAATCCATGATTACTTGCTTCAAAGGTTTCCAAGATCCGACAGTGTGTTTTAAGTGTGTGTGTGTGTTTTTAGTGTG TGTGTGAGAGAAATATTGAGAGATGTGGGAGTGAGTGTCTTT |
Primers for UN04961 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GCATCATACGCTTCTGTGGA | 59.83 | 20 | CACTCACTCCCACATCTCTCA | 58.818 | 21 | 210 | 1520 | 1729 |
| 2 | GCATCATACGCTTCTGTGGA | 59.83 | 20 | ACACTCACTCCCACATCTCTCA | 59.756 | 22 | 211 | 1520 | 1730 |
| 3 | TGATGTTTCCATTTGGGTCA | 59.75 | 20 | CACTCACTCCCACATCTCTCA | 58.818 | 21 | 233 | 1497 | 1729 |