Simple sequence repeat (SSR)
>UN82476 TAGTACTTATAAAATTACGATTGTAGATGGACCCACTAGCTATATATATTCAATAGGTTTTACTTGTACAAAGAATGTGATAACCATCTATGGA TGGTTAAAACGGGCTGATTTTGCTAGCCAACTTTAGCATAAATTCAGGTACAAGGCGACGTCTTGATGGTGCTCTTGATTGCTTTGCAAGAGCT TCTTCATCTCCGGCATGTATAATTGTAACTAAATCGTCAAATAATTTATCATCGCCTCTCATTGGATCCTGAACAAAAACATCTGTGTGAGTTT TCCCCTCATATAACATCAAGTCTGCTTTCACTCCTACTCGTTGGAGAGCATCCACAAATGTTTTACTGCAATCTGCTGGAATAGAATAATCTGC AGTCCCATGAAATAGGACAACTGGGGGTAAGATAGAAACTGCGTTCTTATTGTTCGGGTCTTGCACAATGATTTCTGGAGAATATTTACTCAGA GATTCCTCCCCTCCCATTATGCGATAGAAAAGTGACTTGTATGGGCCTCTTGTATTCAAATGGTTTGCAAGGTTAAACAGATTATATCCTCCTG ATAAGCCAAAATAAGACTTTATCTGGGATACGCTCCATGTACTACTTTGTGTTGGATCAGACTCCTTGATTGCCTGATCCACTAGGGCACAGGC AGCAATATGTGCACCAGCTGACTGTCCCATTAAATAAATCCTGTTGGGATCACCACCATACTCGGAGATATTATTGCACACAAATGAGATACCT CGTGAAGCATCTTGAACCATCTCAGCAATTGTAGCCTTGGGATAATTTCTGTAGTCTATGCATGCCACTATGATGTCTGTATTTGATAAGTGGC GTCCTAAAAGAGAACCCCATGCTTTATACCCTATTACCCAAGCTCCACCAGTGATAAAAGCAATGACAGGCCTTGGACCATTATTTTTCCCATC GTTTTCAGGTAAATATATATCAAGTTTATTCCTTGGTTGATCACCAAAGACAATATCTCGACGTATCTGACTTGAGAAATAATAGTAATAAGCA ACTCTTTACAAACCTTGAAGTACACCTGGCATAATTAGGAATGCGTAACATTGTAGAGATAGAAAACCGGTGAATATTCTATAGCCTGACCCAA TATAAGACAGCATTTTGGATCCGACCCGAACCATAACCGACCTCTCCCCATCAACCCGACCCGAATCAGTCCAGAAAAACCTCCTTCTCCCAAA CCCAGCACGATCAAAACCCATCAAATTGGAATCACTAGCAGCTCTTCTCCTCCTTTGCTGCTGAAAACTTGATGATGACGTCACAGTAGGAATG AAGGGTTTATCTTCAATCAGCAAATGAACATCATCATGGTCATTTGAGGACAAGAAAACTGATCCAGCTCGTTCAATAGCAGATGAAGGAGGAG GAGGAGGGTTTTTGATAGAGATGGGTAAGATGTGTGATGATTGCATGTTGGATATATATAATAGACGTGCTGTTGTTGATCTGCTGCTACTAAA TGATTTGTACATGGGTGGGTGTTTGGTTTTCAATTATTAGTT |
Primers for UN82476 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAACCCAGCACGATCAAAAC | 59.978 | 20 | AGCAGATCAACAACAGCACG | 60.056 | 20 | 276 | 1220 | 1495 |
2 | AAACCCAGCACGATCAAAAC | 59.978 | 20 | TCCAACATGCAATCATCACA | 59.469 | 20 | 243 | 1220 | 1462 |
3 | CCCGAATCAGTCCAGAAAAA | 60.044 | 20 | TCCAACATGCAATCATCACA | 59.469 | 20 | 275 | 1188 | 1462 |