Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN81325
TGATTTTACGCCTCGAATGATTAAGATAATACGATACAACTACAACAACATATATCATACAAGGTACAAGAATGAACCTAAATTTAGCCGAAAA
GTAGAGTAGAGGAATATGAGACCATGGACAAGCTTAATGTAGTCGAGTAACGCTATACAGTAAGCTATAGTTACAACAACAATGGAAGTTTATT
GTTCCATTTATATACACCGATACAGGTGCATAGTCTTATTTTGAAAATTTCTAATCACCACCCGAAAATAATTCAACCTTCACTTTCTTCATGT
ACATAAGTGATACATACCTATGCTTAAACTCGTGTTATAGCTTCTCTTTATGTGGACATGTACATTTTGCGTGATGTTCTGAAAGAGACTCTGC
TTCTTTCTGAAGCTCTTTTATATAGTCGACCGCTAAATCCAACATGTCTGCTGTGTTTGTTTGCTTGTCCATATTTGGGACAAGCTCTTGTAGC
TTCCTCATTCTTTCACTTATTCTGGTCCGTCTTACCCTCTCAGCGATGCTTCTTGGGTGAGTTGCACAACCCCTTTTTGCTCTGCTTCTTAAAG
GCACAGAATCTTGAAATTGCAGCAGTTTATCCAACTCGGCTGTACTTGATGGCAAGCTCATGTGATGCACAAGCGTACTGGGAGCACGTATTCT
CCCAACATCATTCTGATTTTCAGATGGTTTTAAACTCGATAACTTGCTTTGATCAATTTCTCCAAAGTCTTTCAAGAAACTATCAGATAAGATA
TCCGAATCATCCCATGATTGTGAACCAAATCCTCCATCATCACGGCCACTTTTCATATCCATAACTTTGCTCTCATTTTCAGGGATACGCGGCA
AAATACCAGAAGACGTTAGTGAACTAGATGTAAATCCCATTTCATTTTTCATTCTCTTTGTCGAGGAGAGCATTGAGTTCCCCATACCCCTACC
ACCAACTTTGAAATCATCCAACGATCTCATCGCTGGAAAACCATTATCCATATCGAGCTGATCGAAAAACCCGGCTGGTGAGCTACTTTGCCTT
AGCAAATTATTATTCCTTATATTATTCGAATCATTAGTATTAGTCTGATGATCCATTTGTGACTGAAACTGATTCTGTTGTTGTTGTTGTTGCT
GCTGCATTTGGGATTGCATTGCAGGATTGATATTGTTCTGTTGGAGCTTCTGTTTAGCCATTTGATGTAACTGCTGCTGATAGAGATAATGTGA
GTTCGGATTTTGTTGTTGTTGTTGTTGTTGTCGTCGTCGTCGTCTGACATTAAATCTTCAACCGATTGAGATGGAATGTCCAAGCTATCATTTT
TCTCTCCTGGTTTTGAGACTAGAGCTTCTTCTGGTTGAGCTAGAATTCCAGGATCCACTCTCTTTTTAATTCCTGGAATGCCCAATATTTCTTT
GCCACGTCGAGTATGCTTTGGTCCATCAGAATAGGTCAACTGTTTCTTGAAACTTGGAGAATGCTTTCCCGACCACTTTCTCTTGCCAGTTGGA
GAATGTTTTTTTGTGGACGAAGTTATTGCCTTGTCACCGATGTGATTCATTCTGAGCAGGTAAGA

Primers for UN81325 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GCTGGTGAGCTACTTTGCCT 59.64420ACGACGACGACAACAACAAC 59.64820249 10141262
2ATCGAGCTGATCGAAAAACC 59.27320ACGACGACGACAACAACAAC 59.64820271 9921262
3GCTGGTGAGCTACTTTGCCT 59.64420GACGACGACGACAACAACAA 60.76720250 10141263