Simple sequence repeat (SSR)
>UN81324 TGATTTTACGCCTCGAATGATTAAGATAATACGATACAACTACAACAACATATATCATACAAGGTACAAGAATGAACCTAAATTTAGCCGAAAA GTAGAGTAGAGGAATATGAGACCATGGACAAGCTTAATGTAGTCGAGTAACGCTATACAGTAAGCTATAGTTACAACAACAATGGAAGTTTATT GTTCCATTTATATACACCGATACAGGTGCATAGTCTTATTTTGAAAATTTCTAATCACCACCCGAAAATAATTCAACCTTCACTTTCTTCATGT ACATAAGTGATACATACCTATGCTTAAACTCGTGTTATAGCTTCTCTTTATGTGGACATGTACATTTTGCGTGATGTTCTGAAAGAGACTCTGC TTCTTTCTGAAGCTCTTTTATATAGTCGACCGCTAAATCCAACATGTCTGCTGTGTTTGTTTGCTTGTCCATATTTGGGACAAGCTCTTGTAGC TTCCTCATTCTTTCACTTATTCTGGTCCGTCTTACCCTCTCAGCGATGCTTCTTGGGTGAGTTGCACAACCCCTTTTTGCTCTGCTTCTTAAAG GCACAGAATCTTGAAATTGCAGCAGTTTATCCAACTCGGCTGTACTTGATGGCAAGCTCATGTGATGCACAAGCGTACTGGGAGCACGTATTCT CCCAACATCATTCTGATTTTCAGATGGTTTTAAACTCGATAACTTGCTTTGATCAATTTCTCCAAAGTCTTTCAAGAAACTATCAGATAAGATA TCCGAATCATCCCATGATTGTGAACCAAATCCTCCATCATCACGGCCACTTTTCATATCCATAACTTTGCTCTCATTTTCAGGGATACGCGGCA AAATACCAGAAGACGTTAGTGAACTAGATGTAAATCCCATTTCATTTTTCATTCTCTTTGTCGAGGAGAGCATTGAGTTCCCCATACCCCTACC ACCAACTTTGAAATCATCCAACGATCTCATCGCTGGAAAACCATTATCCATATCGAGCTGATCGAAAAACCCGGCTGGTGAGCTACTTTGCCTT AGCAAATTATTATTCCTTATATTATTCGAACCATCCATCCCTGAGGTATTACTATTATTAGTCTGATGATCCATTTGTGACTGAAACTGATTCT GTTGTTGTTGTTGTTGCTGCTGCATTTGGGATTGCATTGCAGGATTGATATTGTTCTGTTGGAGCTTCTGTTTAGCCATTTGATGTAACTGCTG CTGATAGAGATAATGTGAGTTCGGATTTTGTTGTTGTTGTTGTTGTTGTCGTCGTCGTCGTCTGACATTAAATCTTCAACCGATTGAGATGGAA TGTCCAAGCTATCATTTTTCTCTCCTGGTTTTGAGACTAGAGCTTCTTCTGGTTGAGCTAGAATTCCAGGATCCACTCTCTTTTTAATTCCTGG AATGCCCAATATTTCTTTGCCACGTCGAGTATGCTTTGGTCCATCAGAATAGGTCAACTGTTTCTTGAAACTTGGAGAATGCTTTCCCGACCAC TTTCTCTTGCCAGTTGGAGAATGTTTTTTTGTGGACGAAGTTATTGCCTTGTCACCGATGTGATTCATTCTGAGCAGGTAAGA |
Primers for UN81324 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTTGTTGTTGCTGCTGCATT | 59.918 | 20 | GGACATTCCATCTCAATCGG | 60.281 | 20 | 187 | 1135 | 1321 |
2 | GTTGTTGTTGCTGCTGCATT | 59.918 | 20 | TGGACATTCCATCTCAATCG | 59.451 | 20 | 188 | 1135 | 1322 |
3 | TTATTCGAACCATCCATCCC | 59.581 | 20 | GGACATTCCATCTCAATCGG | 60.281 | 20 | 266 | 1056 | 1321 |