Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN81324
TGATTTTACGCCTCGAATGATTAAGATAATACGATACAACTACAACAACATATATCATACAAGGTACAAGAATGAACCTAAATTTAGCCGAAAA
GTAGAGTAGAGGAATATGAGACCATGGACAAGCTTAATGTAGTCGAGTAACGCTATACAGTAAGCTATAGTTACAACAACAATGGAAGTTTATT
GTTCCATTTATATACACCGATACAGGTGCATAGTCTTATTTTGAAAATTTCTAATCACCACCCGAAAATAATTCAACCTTCACTTTCTTCATGT
ACATAAGTGATACATACCTATGCTTAAACTCGTGTTATAGCTTCTCTTTATGTGGACATGTACATTTTGCGTGATGTTCTGAAAGAGACTCTGC
TTCTTTCTGAAGCTCTTTTATATAGTCGACCGCTAAATCCAACATGTCTGCTGTGTTTGTTTGCTTGTCCATATTTGGGACAAGCTCTTGTAGC
TTCCTCATTCTTTCACTTATTCTGGTCCGTCTTACCCTCTCAGCGATGCTTCTTGGGTGAGTTGCACAACCCCTTTTTGCTCTGCTTCTTAAAG
GCACAGAATCTTGAAATTGCAGCAGTTTATCCAACTCGGCTGTACTTGATGGCAAGCTCATGTGATGCACAAGCGTACTGGGAGCACGTATTCT
CCCAACATCATTCTGATTTTCAGATGGTTTTAAACTCGATAACTTGCTTTGATCAATTTCTCCAAAGTCTTTCAAGAAACTATCAGATAAGATA
TCCGAATCATCCCATGATTGTGAACCAAATCCTCCATCATCACGGCCACTTTTCATATCCATAACTTTGCTCTCATTTTCAGGGATACGCGGCA
AAATACCAGAAGACGTTAGTGAACTAGATGTAAATCCCATTTCATTTTTCATTCTCTTTGTCGAGGAGAGCATTGAGTTCCCCATACCCCTACC
ACCAACTTTGAAATCATCCAACGATCTCATCGCTGGAAAACCATTATCCATATCGAGCTGATCGAAAAACCCGGCTGGTGAGCTACTTTGCCTT
AGCAAATTATTATTCCTTATATTATTCGAACCATCCATCCCTGAGGTATTACTATTATTAGTCTGATGATCCATTTGTGACTGAAACTGATTCT
GTTGTTGTTGTTGTTGCTGCTGCATTTGGGATTGCATTGCAGGATTGATATTGTTCTGTTGGAGCTTCTGTTTAGCCATTTGATGTAACTGCTG
CTGATAGAGATAATGTGAGTTCGGATTTTGTTGTTGTTGTTGTTGTTGTCGTCGTCGTCGTCTGACATTAAATCTTCAACCGATTGAGATGGAA
TGTCCAAGCTATCATTTTTCTCTCCTGGTTTTGAGACTAGAGCTTCTTCTGGTTGAGCTAGAATTCCAGGATCCACTCTCTTTTTAATTCCTGG
AATGCCCAATATTTCTTTGCCACGTCGAGTATGCTTTGGTCCATCAGAATAGGTCAACTGTTTCTTGAAACTTGGAGAATGCTTTCCCGACCAC
TTTCTCTTGCCAGTTGGAGAATGTTTTTTTGTGGACGAAGTTATTGCCTTGTCACCGATGTGATTCATTCTGAGCAGGTAAGA

Primers for UN81324 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GTTGTTGTTGCTGCTGCATT 59.91820GGACATTCCATCTCAATCGG 60.28120187 11351321
2GTTGTTGTTGCTGCTGCATT 59.91820TGGACATTCCATCTCAATCG 59.45120188 11351322
3TTATTCGAACCATCCATCCC 59.58120GGACATTCCATCTCAATCGG 60.28120266 10561321