Simple sequence repeat (SSR)
| >UN78579 CTGAAATTTCATTTTATTGAAAACACTTTTAAAATGTACATGGCAGATAGTCGTCATCCTCAGAGAAGATACTCAATTCTCCAGCATATGCTCA ACAAAAAAGAATATATAGAATAATCATGTTTGAGAAAGTCGAAAAACACCTGCACCAATATCAGTTCTGATGAGAGTTTGAGAATCTCATGGTA TAATTTATGTGATTACTGTAGGCTTTTCCCTTCCCGTAAACTCCTTTAGCTTTGACACAGATAAAGCCAGATCTATCAAGGGTTTTAGTGCCAC TTGGGCATCCAAGTCATGTTTTGAGACATCAGGTTCAAACTGTTCTATGTAGATTCTAACAGTTGCACCTGCTGAACCAGTCCCTGATAAACGA AATATGATTCTTGAGCCATCTGTGAAGACAAATCTAACACCTTGCTTCGAAGCTACACTCCCATCCACAGGATCCGTATAATTGAAGTCATCTG CAAGTTGAAGAGTATAATCTCCATACTTGTCCCCTTCTTTACTTTTAGAAATCAAATCCCTAAGATAATTAATCATTTCATTGGCTCCTTCAGA CTCGCATTCTTCATAATCGTATCTAGAGAAGTAGTTCCTGCCGTAAGTCGCCCAATGCTCCTTCACAATGTCAGAGACAGAAACCAATTTCTCT CCAGGTTTCTTGTCTTTGTTTCTGTATGCAATTATAGACAGCCAAGCTAAAACAGCCCAAATACCGTCCTTCTCACGTATGTGATCAGAACCTG TTCCAAAACTTTCTTCCCCACAAATTGACAAAGTTCCTGCGTCCATCAAGTTCCCAAAGAATTTCCAACCAGTGGGAACCTCGAAGAAAGGGAG ATTCAGTTTCTCAGCCACACGATCAAGAGCACCACTTGTTGGCATAGACCGTGCTAAACCCTTTGGGCCACTCTGAAAGTACGGAATAGCTTCT TGTGCATTTGCTGCAATAATAGCAACAGAGTCTGAAGGAGTCACAAAGAACTGTCTACCGAGAATCATATTTCTATCACCATCTCCATCACTTG CAGCTCCGAAATCAGGTCCATTGTCACTATACATAATGTTCACCAAATCCTTCGCATATGTTAGATTAGGATCAGGATGACCGTGTCCAAAATC TTCTAGAGGAACTCCATTGCATATTGAATCCAGACTAGCTCCAAGCTTGTCTACAAATATTGGCTTTGCATAAGCACCTGTAACCGCATGCATT GCATCAAAAGTGAGCCTGAAGTCTGGGCGAGAAACAAGATTTTTGATTAGCGAAAAATCAAAGACCTCCTCCATTAGATCCAAATAATCAGAGA CTGGGTCAACTATTTCTACACTAAAGTTGCCATATTTTGTAACCCCGACACTAGAAAGATCAACATCTGGAATGTCAGCTACCTTTATTTCAGA TATAGAAAGTGTGTTCCCATAAATCAGGTCAGTGATGGACTCGGGAGCAGGTTGACCACTGCTGTAATTGAACTTAATACCCCAATCATATTCA GGCCCACCAGGATTATGGCTTGCACTCATTATAAAACCACCATTTGCCTTTCTCTTCCTTATAATAGCAGATACAGCAGGCGTAGACAAAATAC CTTCCTGGCCCACCAAAACTTTACCAACTCCATTTCCAGCAGCGATTTTAATAATCAACTGAGCAGCTTCTTTATTAAAATACCTTCCATCACC TCCTAATACTAACAACGCATTCTTATAATCCTCCGGTGGCAACGAATTAAACAACGCCTGAATCCAGTTTGCTAAGTAATTCTCTTCCATAAAC ACTTTAACCTTCTTTCTCAAACCACTAGTTCCGGTTTTCTGTCCTTCTATCGGCTTCGTAGCAATCGTACTAACCTTTAGATCTTGAAATTCGG TTGTTGTAGATGACGCTTTAATGACGTAAGCATTTTGTCGTGTTTTAAGTGTTTGTGCGGTGGTGAACGACGGCGAGAAGCTACCTGCGGCAGT TGCACGGGCGACGGCGGTGGCGGTGAGGCGGAAGAGTGACGGAGGTGTGAATATTGACGTTCCGATACCGGCGGTGATCGGCATTGCTATGTGT GTGTGTGTGAGGGTTTTGATCAGTTACTGTGTTTGTGTGTGTGTTTTTAGTTTGTGTGTTTTTGTGTTTGTGTGTTTGGTAGGTTTGACTTGAA GGAGATGATGATATGCAAGTCCCAATT |
Primers for UN78579 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTTAAGTGTTTGTGCGGTGG | 59.627 | 20 | TTGGGACTTGCATATCATCATC | 59.791 | 22 | 264 | 1924 | 2187 |
| 2 | TAAGTGTTTGTGCGGTGGTG | 60.609 | 20 | TTGGGACTTGCATATCATCATC | 59.791 | 22 | 262 | 1926 | 2187 |
| 3 | TTTAAGTGTTTGTGCGGTGG | 59.627 | 20 | TTGGGACTTGCATATCATCA | 57.478 | 20 | 264 | 1924 | 2187 |