Simple sequence repeat (SSR)
>UN78419 GGGCGACTGAATAAACAATTAGAGACCAGTATGAGTATACCATATGAACAAAATGAATTTAGCCTGTGAATGTGTTACCAACCCCAACTTCAAG GATTGCATAAATATATACAACCTGATAAATGTACAGGGTGTGCAAAACAAAGAATTTGAGCATCCTGAATCCCCAACTTGAGGATTCTCTTTGC AGGATGTTACAGATGGAAATTATCTATCATATGGAGAACCACGTCCGCGCCATCAGAATTTATCCAATAGCTCTTCACCTGAATGGTACTATGT GCAACATATCTTTGTGTACTTTTTTTGGAAGCTAACATCGACACGCTCCCAAGATTTTTGAGTAAGACCTTTGATCATAGCCTCTTCAAACTCC TCGGGTGAAACTGAAGAAGGCGTTCCGTTTTGAGCTGCTTCACCAGCTTCTCGTCGATCTGGCTCAACATAGACGATGTGTGGGTACTTCTCAT CTTCTGAAAGAAGATTTGACTTTGGGAGTTCATGTTGACGGCGAATAGAAGATGTTTCCCACCCAACCATGTGGTCATAATTTGCATTAGCATA TGCGACACGACGCTTGAAAGACCCTAAAGCAGAGATGAACTTAATGTCCTTGGAGTCGTTAACCATTCGAATTAGGAGCGGAAGTTCCCCGTCA TCAGTATCGGTGAGGAAGAGATGCTTCCCAGATCTCCCAGCTATCCAGTGTGCAGTTTGTGATGCACTTCTTTCAAGAAACGGAAGACCACAAA GTAACGGTAGCTGCTTATGCCCTCTTGAACCAAGATGTGGAGTAGCAACTGTAATGAAATTTACTGGTTGCAGACCAGCAATTTTAGCTTCACT AGAAGAATTTTCATAGAGTCTCCCAATAGCATATCTTGCAACCAGACCACCTAATGAATGTGCTATAAACGAGATCTTGGACACCCCAGGCCAA CGTTTAGTAACTTCCATCACCTCTTCTGCCAACCTTTCACCCATCCGGTCTACCCCATCAAAAGTCAAGGTCGCTGAATTGCTTTCACTGCAGT GAACAATAACTTTATCAGGGAGCCTCTTGACAAATTGCTTAGCAGCGTACCCCCAATCTGCAGCACTGCCAATGATCCCATTAACCATAATAAC AAGATGATCAGGCTGCACTTTAGTCTCACCAGACACAGCATCAAACCCATCTTTAACAACATTATTATTATTATTATTATTATATCTACTACTT CGTAATGAAGAAGAATTCAATACAGTGGAATGAGTAGTAATTGGTGAAAGAGTGTGGTGGGTGTAGAGTGAAGACAACAGAGGATTGAAAGTGG TTGTTGTAATTGACATTTTTCAGTCCTTTGGTGCTTGCTACTCTGTTTCTTCAGTCC |
Primers for UN78419 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCGCTGAATTGCTTTCACTG | 60.134 | 20 | ACCCACCACACTCTTTCACC | 59.859 | 20 | 274 | 1011 | 1284 |
2 | TGACAAATTGCTTAGCAGCG | 60.155 | 20 | ACCCACCACACTCTTTCACC | 59.859 | 20 | 223 | 1062 | 1284 |
3 | GGAGCCTCTTGACAAATTGC | 59.82 | 20 | ACCCACCACACTCTTTCACC | 59.859 | 20 | 232 | 1053 | 1284 |