Simple sequence repeat (SSR)
>UN73821 GACGATGATATCAAATGGGACTCACAATGATCGTGCTATGAAGCAAATTCATGTGTAATAAATCTTGTATGATAAGGTCTATCACGTGACTACG CATAGCTAACCTAAATAAACTGCACAGTCAAAACTAACTCCCGAGTCAAAAACTCTAGGTTCGTCTTTGTTTTCTTCTATAGAAAGGATCCACC CAGGTCGTGTCTTCTTTCACTGCATTTTCCCATCGTTGTTTGAATATTTGAAGCTCAGTTGTTGATTGCCTTCTTATCTCAGCTCGGACATCTA CAGCATGTTTCTTCAACAAATCCACATGATCAACAGTCTTTTTAGCAGAAGCGCCACCTAAAGTTTGTATTCCTTGATGAACAATAAATTCGCT ATCAACAACTCCTACCTTCTTCGACCGGTCCCCCTGTGCACAATAGCCAAGTTTCATATCCATCCCCCATCCGTGAACAAGATCATTCTGTATA AGATGCCAAGCACAATGCCAAGCAGCTCTGGAGAAAACTGGAGCCATTCCTTCTACAAACCCAGAACATGGTGGCCCCTCACTGTCATCTGAAC ACTTCACACTACCTCTGCTGTCATACACTCTCCTATGAAATTTATTTGATCTCTTCCGTATTGTAATCCTGTGATGTATATCAGTTGAATTTGG ATCTAATGCTGGCTGTGATATCTCTAGCCCTTCTGTTTTAACAATATTCAAGTACCTTTTGGGATTAAAATGTTGCACTCCTAGGTCTTCATCC CAGAGAAATATATAATCATAAATGGACACAGCAGCAGGATGCAGAAATCGTTTTGCAAACCACCACTTTGTTTGGTTCTGAGCAACAATATGTA TGACCTTGTTATTCCACTCAAGATCCCGCCAGCCATCCATTCTCCCATCATAATGGAACAAAATAATCGTAAAATTTGCTTCAAGAAACTTTTG AGCGATGATATTAACATTCCGCTTCTGTTTTAGACCCACTGGCATTGCCAGCAAGTTATGAGAACTGGTATCATTAGCCTTCAATTTTGAACTA CTTGTTGACCACAAAGGTTTTAATTCCAAGTCAGATTTATCTGCAATAATTCCACGTGGTAAACTCTTCAAGCTTGTTGAAGACGACACAGCTT CCTTTGATGTGTAGAACCGATATAATTTTGAATCCAGCTCTGTCTGTATGTATTGATAATTTGTTGTCCTATATACAATGTATAACATTATTGT ACAAATTAATCCCATAAACGGCTTCATACTGAATTTGCACAGTCCCCAATCAAAAATAAGTTGTCGTTTCCTCAAAAGATTCCTCCATTGTTTG AATTCCTTCATAGACGAATATTGGTTCTATATCTTCTCATTCCAAACAATTAGATTCGAACACGAATGAGTAAACTGAGAATAAAATAATCTGA GCAGCAGCAGCAGCAGCAGCTGAAGAGTAAAGTTTTTTATTCGGTACAATGAATAAATCCCGGTCGAATATTCCGGCGTGTTTTGCTATGTGTG TGTATTTGTGTGTGTATATATAGATATTCGTATATTTTTAGAGAGAGAGAAAAAGAAAAGAAAGAAGGAGAAAAGTGTCGGAAATGAGGCTCTC C |
Primers for UN73821 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACTGAATTTGCACAGTCCCC | 59.973 | 20 | GGAATATTCGACCGGGATTT | 59.984 | 20 | 235 | 1250 | 1484 |
2 | ACTGAATTTGCACAGTCCCC | 59.973 | 20 | CGACCGGGATTTATTCATTG | 60.146 | 20 | 227 | 1250 | 1476 |
3 | ACTGAATTTGCACAGTCCCC | 59.973 | 20 | CACACATAGCAAAACACGCC | 60.18 | 20 | 255 | 1250 | 1504 |