Simple sequence repeat (SSR)
>UN04132 CTGAATAGATCCAGATGAGAACACAGAGCATACACACAGAAAGTTTGGCCATCCAGCTGGAGCTTGAGGCTGTTGTGAGAGAAACTTTTCCTCA AATGTTGACTTAGTAGAAGTACTAGATCTTGAGGAAAGCCACCTATAAGGAGACACCCCAGATAACCATTTTGTGACAACTGCAAGATCCTGCC GCCATTCATGCTCTCGCTGCCAGGAACTAGCATCATTAACCAAACTAGCCGATCCTTGAGAAGGCTGAGTCCAGATAGTTATCCGCCCATGAAA ATTAGCAATTAACAAGGCACGAGGGCAAGAAGAAGGCGACCATTCAATAAATTGAACTGAATCCCGTGGAGAATCTGCTATCACATTAAATACA GTTGACTCGGTAGGTCGTTCAGGGATCACAATATGTATTGGAATCCAAAATGGTGGATTTGCATTAGAACTGGGTATACGCGCACAAGTCTCTG ATGCACATGCTATGGCATTTAGCTTTCCGCACCAAGCAACGGCACTAAAATTACGACAAAGTTCGGGCACACTCATTTTAAACAACAAATTAGA GGTAGGCTGCTTCAATCTAATACAAAAGACAGTAGCTGGAGAATCATTGACAGAGGTATCCTCATCCATTTTATCCATCCCATCACCACCGTCA CCTTTATCCATCTCAACGTCACCGTCACCGTTAACGGAATCAGTTACAGTTGGTTGTTGTTGTTGTTCAGTAGATGATGATGATTGTTCTTCGT TGGTGTACGGAATTGAAGTGGAACTCATTTGTTTCAAAAAAGGAAATGAAGAATGTGAATGTTTGATTTATATAATGGAATTGGTTAAAGTCTT TGGTGAAGGTGACAGGGATGGATGACGACTGTGATTTTGATTTGTTTTT |
Primers for UN04132 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCAAGCAACGGCACTAAAAT | 60.131 | 20 | TCAATTCCGTACACCAACGA | 59.964 | 20 | 267 | 502 | 768 |
2 | ACCACCGTCACCTTTATCCA | 60.232 | 20 | TCAATTCCGTACACCAACGA | 59.964 | 20 | 120 | 649 | 768 |
3 | CACCACCGTCACCTTTATCC | 60.232 | 20 | TCAATTCCGTACACCAACGA | 59.964 | 20 | 121 | 648 | 768 |