Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN71772
AAACAGATCCAGATTCATATGTATTAACCACATAAATGGAGCTGTAATTACAAGATATATTAAGTGATATATACACCTCCATGACTGCTAATCC
ACTATCAAGAAATTACAAGATTCATGAAATATCAAGAGAAAGTAGTATACAAAACCAATACACAACAATGCAAGTACATCTATCCAAAACGGAG
TATTGATCATATATAACTTTCTAGAGGTGAACTTTCTAGTGAATCTCTCCTTTTTCTCCTTCTTGAACATCACACTCTTTTCCAATTTGGTATA
AGCATATATCACCACTTGATCTTTGTGTTGCATGTACATATGTTGGGTTATCTTCTTGTGCGAGGAACCACAGCTATCACTTGTGAAGTTTACA
TGACTCCATCACGATCACCTGCATTACTTTTGCGTTTGCTCTTCAAGACCGTAGAAGATGAAGGATTACTGTGCCAGTTGCGTTTCCTCTGATT
AATAAACCAATTGTTTATCTGCTTCAATTGCAGGCCTGTTTCCTGAACTAACCGTGCCTTGTCTTCTTCAGTAGGGTATGGCCATTTGGCATGT
GATTGCCACCAAGATTTTAGAACAGAGGTGGTATCACCAGGAAGTTTCCCTGCCCTCCTTTTGCGTAATATCTCTTCTCTAATGTCTACAATCT
TCTCCTTGTAACCTTGTTTGAGTTCATGCTTTAGCTCTTGCCTGACACGCTCCATCAATGATCTCTCGCTCTCAGTAGGAAGGCCAAATCCCAT
GCTGTCATGAGCATCGAGACTTCCATCAAATAGGTTGGCATCACTGTCTACCTGATCTTCATCGTCATCAGACATCGTTGCACCTGTGCCTTCT
CCAGGTGACACTCCTGTTAAGCTTTGTAGGGACTGCTCAATCTCCCAGCAAGCCATAACTGCTTCCATCGCATGAACTCTAACATGTTGCTGTA
ATTGTTCTTTGAAAGAACAAAGCAATAGAACATAGTGTGTCATAAATTGATCAAGCTCCTTATCGTCATGATCATGATCATGATCAAGATCACC
AAGACTCGAATACTTTGAGACAACCTGCTGAGACTGTGCAAGCTGTGCATCTATTCTAGGCAGCTGATCCACAGGTGTAGCAATTCGCAAACAC
GCTACATGAGCTGCTAACAACTGCTCGTACAAAGGGTGTGACAATACCTCAGCTTTTTGTCTTGCATTTTGCCAGCCCATCAACGCTCCACCAC
CGCCTTCTCCATCACCCGCAACGACCTCAGGTTCTCCTCCTCCAACAACATTATGATGATCAACTACAACCTGGCCAGCAGCAAGGTTTCTTGA
ATGGTCGTTGAAATCATTTCTATCACTTCCTGTTACATTACTGATGTTCCTATGTAGTATCGGTCTCGATAGCCACTGATTATTATTATTATTA
TT
GTGTAGATGGTGCTGTGACGAGGCAGAATCTAAGTTGTTATTATTGGTCTGCAAGTTGAGAAAGATATTACTATTATTGTGGCCAGCTTGTT
GCCTGAGAATTGCGCTATTGAGCCAGTGATCTTTTCCTGTTGAATTGTTGGAGAAAGGTGGTTGCTCAAGTGGTATATCTTGTGAGATATCGTT
AGGAGGATGATATGCCATTTTACGATGGCCTTAGGCTTTGCTGGTTATGGTAATGAGATATTGGAGAGTGAGATATGATGGATATGAATATAAT
AATGGAAAGAAACTCTAGATATACTGCGCATCAAGTGATTTAGTCA

Primers for UN71772 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1CAGGTTCTCCTCCTCCAACA 60.22920GGCTCAATAGCGCAATTCTC 59.95120279 12501528
2AACTACAACCTGGCCAGCAG 60.31220GGCTCAATAGCGCAATTCTC 59.95120245 12841528
3CAGGTTCTCCTCCTCCAACA 60.22920CAACAAGCTGGCCACAATAA 59.72920256 12501505