Simple sequence repeat (SSR)
>UN71310 AACCTAAGTATAGTTGGAAGATTAATGTAACGAAGAAATATAAACTTTAAGCTCACAAAAGTAATTCAACACTAATATAAGTTCATTTCATTAC AAGACGATGGTTTACATGGATTTTACATATGAATTCGGAGATCGGTAGTGTATTTTAGTTGGGGAAAATTCCTTTAGGGATAATGACATCCCCG ATGTTGTTGTGCCATGGGTCAGCCAAGTGAGTTGCCAAGTTCTCCAAGGGTCCGGTACCAGGGTAAGCCGATTGTTGCACAACGAAACCAACAA ATGCCAACAATGCTAGACGTCCATTTTTAATCTCTTTGACCTTGTTCTCGGCAAACGTTTTTGGGTCTTTTGAGTAGCCCAATGGGTCAAAAGC GCCACCGGGGTATTTCTTCTTTTCGGGGTCCTTTTCCATGCTCCTTTGGTGCTCTACGAAGGCAATGGAGATGAACTCTATGGCCAAAATTGTG GGTAGGGTACCCCATGGGACGGGGTTTCCTAGGTAGGTTGCTTGTCCTCCTGGGACAGCAGCCCATTCTTGTGCTTTTACCCAATTGCCCAAAC CTAAAGCTTCGGGTAGCAAGATCCCTGGAACAGCAAGCATAGCCCATCTGCAGTGAATGAGCTCGGACTCCTTGAACCTCTCGAGGTTCGATGG AACCTCACCTAGACGAAGTGGGTCGAACCCAAAGTCACCGGGTGCAGATCCATCTAGGTAAGGTGGTCTTGGCTGCCCGGGCATCCAGTCCGCA GTCATAGAAACCCGAGACGCGTTGGTTGCAACACCAGAAAGTGGCACAGCCGTTGCGAATCTCGACTTGGAAGAAGAGAACATGGATGGGCGGG CTACCGCGGCAATACCGCAACTCATCAATGTGTTAGAAGCCATTCCTAGAAACAAAATATGAGTCTAGAAATGAAATATTTAGTAGTAGTAGTA GTGTTTTGTTGGTTGATGAATAATGGGTGTGGTGAGAATGGTAT |
Primers for UN71310 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTGGTTGCAACACCAGAAAG | 59.734 | 20 | ACCATTCTCACCACACCCAT | 60.096 | 20 | 209 | 774 | 982 |
2 | GTCATAGAAACCCGAGACGC | 59.7 | 20 | ACCATTCTCACCACACCCAT | 60.096 | 20 | 230 | 753 | 982 |
3 | GCAATACCGCAACTCATCAA | 59.694 | 20 | ACCATTCTCACCACACCCAT | 60.096 | 20 | 128 | 855 | 982 |