Simple sequence repeat (SSR)
>UN64534 ATGACAATAAAATTAAACAAAGACCATATGGTCATTGTTTTTGTTCCTTCTAACATTTGCTAAACAAGTAATGAGATTAAACGTCTGCAATTCA AAACAACATCAATTGCATAGATGGTAACGTCTCGAAAAAAACTCAAAATTCTGTATGAGAATTAAAAAAAAAACTATTCAACCGTTGTCACCTG TTGCCATTCTCCATCAACAGCTTCCTTCCATAAAGTGACGTTATTGTCCCCAGAAGCAACAGCCAACAGATTTCCAGTAAGCGACCAAGAGACC CTCCAAACAGGGGCCTTAAAGTCATTTAACACCTTACCCGTCCATTCTTCCCCTTCTTTCTCCCCAGTCCATATCACAACTTTACCATCCTGTG AACCGCTTGCAATTGTGGACTTCGGAAGCCCCAAACTGGGTGCCCAAGCCACATCCCGCACCATATCGCTATGCATTTTAAGAGCCGAAACAGA GTCCATTTTCCATGCTCCATTAGCAAACTTCCAGATCTTCACTGTGTTATCGTTACCACCAGAAGCTAATTTCTGAACCGGGTCAAACTCGCCC GAACCAATCAAAGAACCGGGCTCCATTGAAGGGGCCCACGTGATAGAAGTGACCCCAACAGGGTGAGCTTGGTCTATCCTTGTTGTGTCCCACC CACCATCTGACCTGGCTGTGTGAACCGAGATGTTCCCATCAGAGGACCCACAAGCCAAGCAAAGGCCAAGCTCGTGAGGTGCCCATGCTATTGA GTTTACAGATGACTTGTGGTCATTGAAGATATGAGCGTGTGACCAGTCGTTTAAACTACCTTCTTTCCAAATAATCACGGTGCCATCATATGCA CATGATGCAAGAAGTGAGCCAAACTTGGGGTGGGCCCAAGTAACCTGCCAAACAGGACCATTTTTACCGGTCAAAGTCGCAAGGGGCTGGGAGT TTACACTAGTTATCTTAATATTGCCATCAGAAGAGGCAGACGCCACCCGCTTTCCATAATAATCCATAGTGACATCATGGATGATGTCTGTGTG ACCTGTTTCTATCTTTTGCCCAGGCATGATTCGCTATACTTGCTTGATCCTTTTGAAGAAGAAGAAGAAGATTAGTTGTTTTGTAAAAGGTGAG GGTTTCTTTGTTAGACAAA |
Primers for UN64534 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCACCCGCTTTCCATAATAA | 59.789 | 20 | CAAAGAAACCCTCACCTTTTACA | 59.564 | 23 | 156 | 983 | 1138 |
2 | CCACCCGCTTTCCATAATAA | 59.789 | 20 | TGTCTAACAAAGAAACCCTCACC | 59.552 | 23 | 163 | 983 | 1145 |
3 | ATTGCCATCAGAAGAGGCAG | 60.362 | 20 | CAAAGAAACCCTCACCTTTTACA | 59.564 | 23 | 179 | 960 | 1138 |