Simple sequence repeat (SSR)
>UN64313 TTATGATACATAGGATACAAAATAGTCCTGCCGGTAAAAAGATGCAGAAGAAAAGTGTTTGCGACGAGTAGGTAGTTGTAATTCATTCAGTCTT CTACTAAGACCTCGTCCATGTTAAGCACTTTGCACGTATCCTCAAAAAGATCGATACATTCTACATATGCATCATTTAGGCGGCTGAATGCACA AACCCATTGACCCAATGCATAAGCTCGTAGTTCCAATGCATCAGCCCGGAGAGCCAATCGAAGAACCTGTCGTTCCAATCGTTCCAATGCATCA GCACGTTGTTGAAATGCATCAGCTTGCGGTCCCTCTGCACCAGTCCGACATTCTAATAATTCAACTCTCCGTTCTGATAGAGAAGACAAGCGAT CCGTTGCATCTTTTGCACGTCTCAACACATCAACCTTCCGGTTCGAGAAAACACGCTCCAATCGCGAAGTAACAGACTTCCGTTGCGATACATA CTTCTTAAATGCCTTATAACCTCTTTTGGTGTATCGAAAGCGTCTAGTAGTAGTAGTAGTGGATGACGATATCTTGTGCTTAGCAATGGAAAGG CGAGTTGAGTAAAGAGGTTTAATATCCTTCAATGTGCATTCGAAGTTGCATTGAGGGCACTTCCCAGGGGAACTTTGATCTTCTTGTTGAAGCA ATTTGTTGATACATGACCTTCCATATATATGTCCACAAGAAAGAGAACAAATTTGATGAACTCCGTCACTAGACCAAGGTTGAAAGCAAATAGG GCAAACATCGAAAACTTCACAACAAGTATGATGATTGTCATTATCCCTCTTCCTCTTCTTCTTATTCATCAACAAGGACTCCTTTTCATCATCA TCATCATCATCACCTTGATCATGATGATGACTAGAAGATGGTATTTGGTCATTTAACATGTTTGTTTTATGGGAAGATAAAATTAGATAATATA TGAGAAGGAGAGAGAGAAGGTTTTAAAGTATAAAGTATGGTTATATGATTAATGT |
Primers for UN64313 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AGCAAATAGGGCAAACATCG | 60.096 | 20 | AAAACCTTCTCTCTCTCCTTCTCA | 59.207 | 24 | 222 | 743 | 964 |
2 | AGCAAATAGGGCAAACATCG | 60.096 | 20 | AAACCTTCTCTCTCTCCTTCTCA | 57.91 | 23 | 221 | 743 | 963 |
3 | GGGCAAACATCGAAAACTTC | 59.551 | 20 | AAAACCTTCTCTCTCTCCTTCTCA | 59.207 | 24 | 214 | 751 | 964 |