Simple sequence repeat (SSR)
| >UN03280 TGTTCATTAGAATTTTTGAAATTAAAATAATGATCTCTCTCCTCTTTTTAGTTACAACCCAGAGTTAACTTGCAAACAATTACCATACAACAAC AATTGAATCAATGAATGACTGTTGCTAAATGAAAAGCGCAATACCCTACAGCAAGCAACAGGACGTATTTCTTTTGTACAATTAGATAAAGCGA CACAAACTTATTAGTACATATACATAACTCGTATTACTTGAATAGATCTCAAGTACAAATTCCCAGAAATAGCTCACCTTGCACATATCATACA GCTTTAAATTCATTTTGTTGCTTCATACAGCTGGTCTGCGAAAACCTTATTGTTTCTTAAATTCCTCTGCATTAAATTTGTTCCATGCTTCCTT TAAAAGTTCAAAAACTTTCTCTGCAATATACTTTTGTTCAATGCTTGCACCCTTCTGCTGAACTTTGTCTGGATGAACACATAAAGTTGCTTTG TAGTATGCTTTTTTGACGGCTGTAGATGTAATCAAATCAGTCAATGAAATTGCCTGCCACCCACTTCCAGCCCAAAGTACATGTTGTAATGAAG ATATTAGAGCACGCAAATTTCCTTCTTTTCCCACAGCCCATCGCTTTATATCACCCTCTAGAGTTGCAGCAACCCTATGCTTCTCGTCTTGCTC TCTCTGCGCCTGATAGTCACGCTTGTTCTTCTCATTGAGTGCTTTAACCATGCGCTCCCGGGTTGCTAAGTGCTGGTTGTATCTTGCTTGTCTT CTTTCTGCACTTTCTCCTTCGATTTCCTGAAATTCTCCTGATGGAGGTGCGTCTCCCATTCCAAAAAGATAATCAAAATCATTGGTATTCTTAG GCTTCAAGGATGCCTTCTTCGTGTTGTGTGAGCTATCAAACGAAGGCTTCTTCGAGTTGTGTGAGCTCTTAAACGAGGCTTTCTTCTCTACTTT AGGAGCAACATTGTTGTTGAAAAGAGCATCATAAACAGAATCCTCACTTGTAGAGCTTTGGCTTGGTCTAGTATTTGACTGAGTGCCCGTGTTG AACATCGAATCTAGATAATCATCCACACCGGAAGCTCCATAGTTTGCTTTAGAGGTCCCCTGTGTATTCTCAAACATCACAAAGGGGTCTTCAG CAGAGGGTGAAAATGCTTTTGCTGAATTACCACTTGATTGAAAAGCAGGAATTGCTTCTGATTTCCTTCCATTACTTGACGAACTTTTAGCACC AAAACCAAAACCCGACAGCAAATCATCCGAACCCGAACCAACTTCCGCCTTCTTCACTTCATTCCTTTTCACACCATTCGCCTTCGCCCCATTT CCACCAAAATTCCCAAGCAAATCATCAAAATTCAACCCCTTTCCAGTCGAACCACTACTCGACTTGACACCCATCCCACCAAACCCCCCAACCA AATCATCAACCGAATTCGCCTTCTTAACACCACCCGAAACATGAAAAAAATCACCACTAGAACTACTTTTCTTTAACCCAAAAACATCATCATC ATCATCATTAAAACCATCAAAACCAAAACTTTTGGAAACATTAACACTATTCCCTCCAAACCCACCTCCAAAAACATCATCAAAACCAGAAAAG TGTGGGTTTTGATTGTTATTGGATGATCTAAAGATACCATCAAGATCATCAACATTAATTGAATTCTGGGTATTATTATTAATATGATTATGAT TTGTGTTGGGTTTTTGGGTGTTTTTTAAATCTGCTAATGGGGCTGATGATTTCCCATAAGCTTTGAAACCAATACTTTCTACTAACACACCAAA CTGATCCATTAAAACAAATACAAAT |
Primers for UN03280 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ACTCGACTTGACACCCATCC | 59.969 | 20 | TGGGTTTGGAGGGAATAGTG | 59.784 | 20 | 196 | 1373 | 1568 |
| 2 | CCTTCTTAACACCACCCGAA | 59.964 | 20 | TGGGTTTGGAGGGAATAGTG | 59.784 | 20 | 140 | 1429 | 1568 |
| 3 | TAACACCACCCGAAACATGA | 59.816 | 20 | ACCCAAAAACCCAACACAAA | 60.103 | 20 | 277 | 1435 | 1711 |