Simple sequence repeat (SSR)
| >UN03213 CTACAAGTTCACAATTGGTCGAATTTAAGCTACAAAAAGTAACCGAAAGGCCTATATAAGTTATAAACTTTGCTCAACTAGTTTTCAACAAAAA GACAGGTGGGAGAATCACACCAAAGCCGCATTTTGACATGTTTGTAGCCTTGCTTCCTCTTAAATCTCGAGATTCAAATTTTGTGCACACTATA AGAACTTGTAATTGAAACTCAGATGCCTGATGATATCATCAAGTCATTTTGTTCTGAATTTGTCTATGAACGTGCACTAGAAACTCGACGTATG AGAGACCACCTGGAGACTTGTCTTCCACCATGTATGAGAAAAAGAGCATTCCTGATGGATCTCCTTTCTTGCACAGTTTTAAGCGAAGGTAGTT GCATCTTTGGCTCCTGATCTCGTTTATAACCTCATTTAGTTTCTTGGACAATGGATTGTCGTATTGTTGCAATACAAACTGACTAGGAACTTCA TCAATAGAAGAAATTCCAAACATTTGTCGAGTTATGTCAGGATCTGCAGCACTTCCGATATAAATTAAGCAATCCTCACCGTTTTCGAGAAGAT AGATTCCATTTTCGCTCAATTGTTCACTTGAAAGAGGCATAACAGCAGGAATAACAGATCCCTCTGCATCCTTTGTATTGAGGTCATGAATGCT TATCATCCTGGGGTAAACAAGCGGAATTGCCAGTTGTGCAGAGAGAGGGAAAACATAGTTGATCCAGAATGACCGATCGTCTATCCGTGCATCA GTCCGCATTCCAATACTTTTAATCAAAGCAAGAGTATACAAAGGCAACAGTTTAAGTGCCTCTGGAAGAATTAGTTGTCCAGATGATGACACAG TAGCACAAAACTTGCGATAAGCGTGAAGAATGTTGATGCAGAGGTTTGTCACTTGCTCCCTTACTTGTAATAATGGGCTTGTAAGAATTTCATT CGCAGCTTGTTTTAGAAAACATGAAAATTGTGTATCTAAATCAGCTGAGCGGAAGAGATTACTTAACATAGTTGTGCATGGTAAAGACAAGGTA GAGACACGTATTCTTCTTTGTCCATACACGGTAGTATAAAGAAGTGCACACTGGAAAGAACATTCATTGCCATCTTGCAACTTGTCGTCATGTT TCAGAGTTACCATGATGGTTTTGTCACAATCAATCGCAGGTAGATCCACATCTGTCGGAATGCGCTTACAGAAGTTTCCAGAGTATTCTTGTAC TTGGAGACCCTGACTGCATCTAACGCGCATAACTGCTTCAAACCCTTGTGGCCTTGTAACATTCCATCTAAGATCATTGTATAGTTTTGCTGGA TCCGAAAGAGCAGTATATGGGTGATAATAATATACCTGTCCTCCTGTCGTTCTTGGGATGATGGAGATTGAAGCAATGTCTACATAACTTTGTG TAGTGATGAAAACATCAACAGAGACCTGGTACTCTGCGAATTCAATGGCCATTGTCTTTAAAGTCTTGTCTGCTGGTTGGAGTAGTTTATGAGG TTCCTTTTCTCCTGCGGATATATTAGTTCTTCCTTCAGCTTCTCGAGCAGAAAGAGCCGCAATACCAACAGAAGGCAAGACTGATTGAAATACC AAAAGTTTGCCTCCGGTGCTCTTCATTGCCAGAAAGGCAGCCTTTATCCCGGCACCAAAAGCTGAGTCAGCGGTTTTATTATTTTGAAACATAG TTGGGATGCTTTCCAGTAGTAGATCTAGATGCTCACGACACTCAGAAAGCGGAACAATAACATCAGTTTGAAGAGGAGTGTAAACATCTTGAAT ATCAGGAACAATTAGCATCAATGGCTGCTGTAATGCACGTTTCAGGTTGTAAAAGTGGATGGTCGAGTCAAAAGTAGCAATTCCAACCATCGTC CGAGGACCCTCGGGAAGATCCGCGATAACTTGGCTGATAGCACTGCAAGCTCCGGCTGTAGCACCAGTTTGTACGGCGTTCATTGATACATCAA TGAGGAAGAAAAACACAGCAGGCATTGGATCACGCACCATAAACTCCCTTGTAGCAATAAATTCAACTGTGCCTCTACATAGCTCAGGCCTCTC ATCAGCATCTCTTCGTCTGCCATCTGGGCCTAAATTGCACTGATAATCACGTGGAGTTTCATCTGTAAAACCACAGAAGTTACAGATAAAACGT CTTCCTTGGTCAACGAATTTCATGAATGGATTAATGTAGCCTTTGCAACGAGAACAACGAACGGGACCACTTTCCCCAAAATCCACTACTTGAA TGGGCTCCTCGGATGGATGAGGGAGGGCCAAAGGCTGGACTAACAAAGCCAATTGCATCCCTGAAGTGGTCAAAAGATCGGTAGTGCAAGCAAT CTGATTGATTGTACACCTCATGTACCGTGGACTGCAGTTTCCAGTATCTTTTACAATAAATTCACTTGTAGCAGGCGGTGGAGGATTGGCCTGG TTGCCCTGGCGAGTTTCATGCAAAAGAACTGAGGGATTGGGCATAGGGCGTGGAATTTGGTTCGGATCAATCTTTGATGGTCCCGTAACTGCAG CTCCACCAGCACTCATAGCTGGTGATATTGTAGCCATTGCTTGCTGATTAGGAAGTGGTGGTTGAAAGCCAAAATTTCTTTGTGGTTGAGCAGA ACCAGGGATTGGTGGAGGCGGTACGTTTTGTCGGGGTTGCATTTGCCATGGTTGAGCCCCAAAAGGAGAAGCTTGCGGTGGAGGGGGCATGCCT TGACCCTGAGCTGAAAACGGCGGAGGTCCTCTCGGTGGCCCTGAAAACGGGGGCGCAATCGACGGTAGTGGCCCTCTCGGTTGATTATCCAGTG AACTTCCAAACGGACTTGCCTGTCCTGGAAAAGGCGGTGACGCCATACTTGGTGGAGAAGGTGAAGGTCCGACAGATGGTCTCGCCATTGGTCC AACACCACTTTGCATACCACCTGGTGGTCCAAAAGGAGGCGGGCCATTACTCACCATACCACCACCACCACCTACATTCGGAGGCGGTCCCATA GGCGGACCAGCAAACGGTCCTGCACCAGGACGAGGACCAGGCACACTCATTCCCGGTCCAGAAGCCATAGGCCTTGCACCAAACGGAGGCACAT TACCACCACCAGGAGGACCTCGGTTCGGTCCCATCATAGGAGGCAATGTACCTTGCGTCGGTCCACCAACATTTGGCCCTACACCTCTAGGAAC CACACCAGGCGGTGGCGCTCCCGGACGCACATTAGGTCCAGAAAACGGAGACGAAAACGGAACAGGACCTCTACCCGAATTCGGTGGCTGATTA GGTGGGCGATTAATATTCAAATTTTGCAAATTATCAGCAACCATATTAGGATTATAATTAGGCCTAGTTCCACCCGGAGTCGCCATCGAAACAC GATCCACAATTCACACACTGAGTGTGATTGGATTGAGTGAATTTAGGGTTTGTGAGAAGAACCAGAGAGCGAAGATCAAGGAAGAAGA |
Primers for UN03213 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GTGAAGGTCCGACAGATGGT | 59.969 | 20 | AATGAGTGTGCCTGGTCCTC | 60.12 | 20 | 179 | 2881 | 3059 |
| 2 | GTGAAGGTCCGACAGATGGT | 59.969 | 20 | GAATGAGTGTGCCTGGTCCT | 60.12 | 20 | 180 | 2881 | 3060 |
| 3 | GTGAAGGTCCGACAGATGGT | 59.969 | 20 | GTAATGTGCCTCCGTTTGGT | 59.859 | 20 | 225 | 2881 | 3105 |