Simple sequence repeat (SSR)
>UN58661 TTTATTCCATAACGTGACTAATAAGCACCAAGAATGTAAAATCAAACATCTCTAGCCAAGCCTGAAAGATCAACATGTCCATCATGAGTGTCTG GTTTATCAGCCTTGGAAGGTGAAGATTCAACGGGTACATTCCGTTTTGAAGGCTGTCGTCGTGGTGGTGGTGGTGATAGAGACCCAAAAGTGGA TTCAGATTCACCGTCATATAAATGAGGAGACCCAAAGATATTGAAAAACCCGTTCTTCATTTCTTCAGCAGCCTCAAAGAATCGGTTCATGTTG CCAAACAAGTTGCGTTCAATTGCATCTATGTCACTGCGTAGTCCAGGAAAGTCAAATGGTGCAACTTGTGATGACAAAGAACCACCGTTTGTTA TCTGGTCTGTAACATCTTCCTCTGTGTATTCCTTGTTGGACTGAACCACCTCCGTTGGCCTTCCAACGCAATCTTTGAGAATCTGCTCAGTCTT CTCACACTTTTTAATAAACTTGCCAGGCTCAACCTCCTCAGTTCTGCATTGAGACGAAACCATCCTCCTAGTAGAACATCTCTCTTCAGATCTA GCGCTTATTTCACCACCTGACCTCTTCTCATCATTCTCATCCTCCTCGTCTTTCCATACCCATCCCATGTTTTGGTTTCTTCTTGCACAACCCA GAAGATTTGTTTTTGGGTTATTTATTTGTTTGGTTGTGAAGGTCGGTTTGTGGGTTAGAAATTTGGTT |
Primers for UN58661 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CATTCCGTTTTGAAGGCTGT | 60.11 | 20 | GAACCGATTCTTTGAGGCTG | 59.813 | 20 | 146 | 131 | 276 |
2 | ACATTCCGTTTTGAAGGCTG | 60.11 | 20 | GAACCGATTCTTTGAGGCTG | 59.813 | 20 | 147 | 130 | 276 |
3 | CATTCCGTTTTGAAGGCTGT | 60.11 | 20 | TGAACCGATTCTTTGAGGCT | 59.813 | 20 | 147 | 131 | 277 |