Simple sequence repeat (SSR)
>UN56527 CAGAGTTCATCTTTACATTTTCTCAAAAATGTGAAATTGCAGCAAGCATATAATTGTATTCTTGCATCATATGGAAAGAAATCACACTAATTTT GATGTAAGCTAACATCACAATATTAACCTATGTTTCCTGTAAATTTTAAGCATTACAAATAACTTCGATAGGTACAGTGCAAATAATTCAACTT CAGTCATTATGTCTGCGCCGTCGGAAATGCCTTAGGATAAAACTGTCTGCATATAAAGGATAGTTTTTCCTAATCAAACCTTTTATGCATTTCC AATAGGAAAAATCGACCATTTCTCCATCTGTCCGGACAATGAACAAACATCTTGAGCTTTCAAAATCTGGATGGTAACCAACCGTGATGTAACT AACGCCACATCCAATCTTCTTCTCACTCTCGGGATGATGTGGTAACAATCTCTCTAGAATAGTTCTTTCATGTTCAGGACTTAACCTCTCACCA CTTGCATATTTGCCAGAATGAAGAATCATCCTAACAAAACCAACTAAAGGAACAGTATCTTCCAATATCTGATCCTCCCAATCAATCCACCCAT CTTTCCTTCCATCATCATCATCATTACCATCATCATCATCCTCTTTCACCACAGGTTTCCGTAGCAAATCCGCAGCACCTCCTTCATACTGACC ACCACCACCATTACTACTACCAACACTAGCTCTCAATGCACAAAATCGATGTGAAGAACGCCATGTAGGAAAACGATAAGGAAATGATGAAGAT GAAGATTGGATAAGGTTTGTGTGGTGGAGATTGAATTGTAATGATAATGACGTGGAGATTGATTGCATTTTTATGTGAGTGTTTCACGGTTGTT CCTAATTACGTGCACATTGTTGATTTTGATTTTTTTTTAATTTATTCGCTAAAAAAGGGCGGGGGGTTGTTAACTGATCAATAGTACTCTAGTA GA |
Primers for UN56527 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCGGGATGATGTGGTAACAA | 59.774 | 20 | ACGGAAACCTGTGGTGAAAG | 60.005 | 20 | 222 | 405 | 626 |
2 | CCGTGATGTAACTAACGCCA | 59.609 | 20 | ACGGAAACCTGTGGTGAAAG | 60.005 | 20 | 263 | 364 | 626 |
3 | AACGCCACATCCAATCTTCT | 59.556 | 20 | ACGGAAACCTGTGGTGAAAG | 60.005 | 20 | 250 | 377 | 626 |