Simple sequence repeat (SSR)
>UN54787 GTCTGGTTACTCTCTTTTTCATCATTATCTTGGTCAACTTCAGTCAAAGACCCCAACTTTAACAAATTTTGAGGTGATTGCATTGATATAAAAG TCAAAAATGCAAAAAGAAAGATACCCATTATAGTAAATGAGATTCTCCTTCTTGGGTATGTGACAAAATTTGATCTTGGTTGGTTTAAGGAAAT TGGTAAATTTGATGGTTGGTTTTGTGGTTGGTTTTGAGGTTGGTTTTGTGGGTGGTTTGAGACAGTGAAAGCTGTAATGGTTTTGCCTAAAGAT GGGTTGTCTGCAGGTGGCAAAGTGATGATCACAAACCCTTTTAAGTGTGAGTGATCTTGATCATCATTTGATGACATTTTTTGTTAGATTAGAT TAGATTATGATGTTGGGTTTAGAGAGATAAAGGGGTTGATGATGATGATGATGGAATGAATGAAGGAGAGTGGTTGAATGTAT |
Primers for UN54787 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTGTGGGTGGTTTGAGACA | 59.976 | 20 | TTCAACCACTCTCCTTCATTCA | 59.711 | 22 | 222 | 233 | 454 |
2 | TGGTTTTGCCTAAAGATGGG | 59.931 | 20 | TTCAACCACTCTCCTTCATTCA | 59.711 | 22 | 189 | 266 | 454 |
3 | TGGGTGGTTTGAGACAGTGA | 60.129 | 20 | TTCAACCACTCTCCTTCATTCA | 59.711 | 22 | 218 | 237 | 454 |