Simple sequence repeat (SSR)
| >UN54081 AGGGAATAGATAAACATCATTTCTGCATAAGAAGTTTACAAGTAGACATTACATGCGCTGATCAAAGCTAAATCATAAGTGAATCTGCACCATG TTGCTGAAGAAGTAAATCAAAATCTCCTTCGAGGACTTCTTGATCGATTGCTCCTTCTGTTATTCCTCCTTTTGAAAGGACCTCTGCTAAATGC CCAGTCAACATTGACCGTTTGGGTGAGAAGCTCACCTCCATCCATCGAGGTTATAGCTTTCTCTGCTTCCTCGTAACTTTCATATTCAATGAGC GCATACCCCTTGACAAATCCAGTTCGACGGTCAAGATTCAGATGCAAATTCTTAATCTCCCCAAACTCTCCAAATGCATTTTGTAAATCATCTT CTTGTCCCTCTTCATGCACTCCGGTAACTAAAATGATCCATCCTTCGATTGATCGTTCAGGACCAGGTCCACCATCAGAATCAAGCGAATCGAA GCGTCCAGACATACGATTACTAGCATCAGTTTCATCACGGAACCCACGCCCTTTGGTTTTCTTAACACCGGCGCCGCCGCCGCCAGTGATGGCG GATTTGAGTTTAGGGATGGTGGCGGTTGGAGAAAGTGTGTCTTCTTCCATTAGGTCATCGTCGTCTGGTTCGAAGTCTAGTGTATCCACGTCAG CTGCTGCGTTCGACATTGTTAATTCTTTATGGTGTGTGTGTGTGTTTGAGAAGTGGTTTTTGTTTTGTTGATAGTGTTGCG |
Primers for UN54081 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TTGAGTTTAGGGATGGTGGC | 59.933 | 20 | CGCAACACTATCAACAAAACAAA | 60.082 | 23 | 172 | 568 | 739 |
| 2 | AGGTCATCGTCGTCTGGTTC | 60.12 | 20 | CGCAACACTATCAACAAAACAAA | 60.082 | 23 | 124 | 616 | 739 |
| 3 | TTGGTTTTCTTAACACCGGC | 59.975 | 20 | CGCAACACTATCAACAAAACAA | 58.796 | 22 | 217 | 523 | 739 |