Simple sequence repeat (SSR)
| >UN02344 CAAAAGTCTTTACAATAAAAATGCAGCAAATTGGATTATAATTCTACAGATAAAGTGACTCAGGCTTCGCCTATTTACAGGGAGGGTTGTAAGC AGTATACACAAAACAGAATAAAAGATGGAAACAGATAAGGCAGTACATATAGAAATGATTATATTAAGAACGTACGCCCACGGCCAATGTCATG TGTAGAATGAAGATTAAAACAAGTATATGCCTGTATGAGAGATTATAACCATGTATCACGAGGGTATGTTGAAGTGAAAAAGCCATGATATCAC AAACGCAAAAACCAAACATGCCAAAATGAAATTCAGAATTCTGTGTCCATTGATGCACCCCCGGCCTCGTGTTGCTGTTGACATGTGTGTCGTG GCTACACTTGTTGCTGCCGGATTCACATCCATTGTTCCTTGAGTTGTCGATGGCGTTTCATTTGCAACGACTAGGTTGCTTACAATTGAATTGC AGATTTCACATATTTTGTTGCCTTTGATTTTGAACCAAGTATCAGCACAATGTTGATGAGCAAGAGCTAAGTCATCTTTACAGCAACAACCCAA TTCAATCAACTCATCATCCTCTTGTTCATCATTATCAACAAGACTATTGAGCTGGCAAATTCTGCAATCTCTCATGCTATCCACTACTAGAATA CTAACAACAACATTTTTCTTCTTCTCATTCAGCTGCACAGAACAATCAGAAGAGGAAGAAGAAATTCTGCCAATTTCAATATCATTGTAAAACT GAGAATAGCAAGAACCAACTTCTTCTTCTTCTTCTTCTTCGTCAGCTTCCGATTCAGATTTTTATTGATTCAAATATCTTCTCGTACGGATGAT TTTGGAACCGCAGAAAACAAACACAACAGACGTTATCTTCTTCATCATCTGGATTTGCTGAAGTGATAGGTATCAAGCGGTGAAATCAGAGGTG ATGTGCATATTTGAAGACACGTGTTTTGGCAATCGACTTTATCCAAAATCTTCAACAT |
Primers for UN02344 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GCTGGCAAATTCTGCAATCT | 60.361 | 20 | TTTTCTGCGGTTCCAAAATC | 60.053 | 20 | 249 | 615 | 863 |
| 2 | GCTGGCAAATTCTGCAATCT | 60.361 | 20 | TTCTGCGGTTCCAAAATCAT | 60.448 | 20 | 247 | 615 | 861 |
| 3 | TCAGCTGCACAGAACAATCA | 59.113 | 20 | TTTTCTGCGGTTCCAAAATC | 60.053 | 20 | 177 | 687 | 863 |