Simple sequence repeat (SSR)
>UN02321 TTCGAATTGAGGATTTACAAGACATTTGTTAAATAATTTGAACCTGTTGCTGGAATTGAATTCCAGAAGTATATGTTAAATATAACATGTATCT GTACAACAACAATGACATAATAATTGTATTAAACAATCATTGGAGTTACAGGAGGTCCTTATTCCTCTGGGTCAGTGTTATTATCACTGGAGGG CCTTTGTCTTATTTCTGATGTGGTAAGTGGTACTTCTGATGTAACGTGTAGTGGACGGGTTCCTGAGGATGATGCTAACAAATGGTCATCAGCT GAACTTGAAGCATAATTGTAAGTGAAGACTCCCATTGGATGGTCAAACTTGCAACTTGGACCAAATTTGCATATTCCATAACGAGAATAGAAAA TGCACAACGGCTCTCCCGGACGTAAAGGAAGCCCAATTGGACTCAGGTCACAGTCAGGCATGGGAATCGCCCTCTCTCTGGGGTGGTGAAATCT GCAAACTGCACCAAACTTACAGTCTCCGGTCTTCATGTAAAATTGGCAATCAGGCTGACCAGGCCTCTCGGGGAATACATTCTCTGTTGGTAAA GCATAATAAGATGAATATGTTCCAGTTAGTGTTCCATTATCTGTTTCATACTGCCGTGAAGTTCCATAGATTTGATTGTTTCCAGCTGCTTGTT GTTGGTTCTCTAATGATGAAAGTGAACCCAAAGAACCTCTGTAGGCACTCCATCCTGGAACAGAAACAACACCCTGAGGTAGTATCATTTGTGC ATAATTTGAAGGGGCTTGCCAATGCGGACTAGGAACATAGGAAGCACTAGGCAAGGACCAGTTTGTTGTTACTCCTGGGTATGACTGTTGACCA GGACTTGTTGGCGACTGCACCGTAGGATATACTGAAGAACCACTAAATGCGACCATCATGTTAGATGGTTGAGGGTGGTGAAATTTACAAGTGT TTCCAAACTTGCATTGTCCGGTTCTTATAAAATAAGCACATTCAGGCTCATTCGGACGGAGTGGATATCCCAAAACATTTAGTGAAACTCGCCC TGCAATTCCAGCCATTTCTCGAGGATGATGAAACTTGCATGTTGGTCCAAATTTGCAGGTACCCATCTTTAAGTAGTACTCACATTCAGGTTGT CCTGGTCTTTCTGGATATTCTCCTCTCATTTTCGCAGTTGCAATAGCCAGTTTCCTGTTAGGAGGATGATTAAAACGACATGTTGCCCCAAACC TACAAAGGCCGGTTCTGATGTAGTACGAACAATCTGGCTCTCCTTCACGCACAGGATAAGGTCCTGACTCCATTGGTTCCCTTGATCTTAAGTT CAGTTGCCACAGTGTGTCTTCATCTAAAGGCTGAGACACTTGGGGTCGTGACATCGAAATTTCGCTATGGTACAACATATTATCACCACTAATA ATTCATCTCCATCATCCATCACTTCATCTCCATCAATAACATCACTCACAACATATATGTCTAGCTAATTATTGTACGAGTTAAGTGTGTGTGA GAGAGAAAGGTGTGTTAGTGTGTGAAACAGAATTTGTTTTAAAATTCAGTTACGATTGATCAAAGTGTGTGTGTGTGTTTGTGTTTGTGGTTAG TTGTAAAAGAGGGAAGAAGAAGAA |
Primers for UN02321 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACACTTGGGGTCGTGACATC | 60.851 | 20 | TTCCCTCTTTTACAACTAACCACA | 59.138 | 24 | 262 | 1352 | 1613 |
2 | ACACTTGGGGTCGTGACATC | 60.851 | 20 | TCCCTCTTTTACAACTAACCACAA | 59.138 | 24 | 261 | 1352 | 1612 |
3 | GACACTTGGGGTCGTGACAT | 60.851 | 20 | TTCCCTCTTTTACAACTAACCACA | 59.138 | 24 | 263 | 1351 | 1613 |