Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN46269
TCCATTAGCAAATTTCATTATACATAAATTCTCAGTAATTTCTACTTCAATATATGAGTATCAAAAAGAGGCCAAAATAGCATTACATTACAAG
CTACAAACAGGATGTTTAGTAATAAGAAAATGCACATAATTTGCAATTACATTTTGTTCATTTGGAAGAATTACGCTGCAACAGCAAGTTCCTC
GGTTTTCTTCTCTCTTTCCTTGATTGTTTGCTTCCATTTTTCTTCACTGTCGATGATTTCACCAGTTTTTATCAAATATCGTACCCGTTTACCG
TCTTCTAAAATCTTGTGACCTACACGGCTTGCAACATTCTGTTCTTTCGAGTACAACATCACATTTGAGCTATGAATAGGTGCTTCGATCTTGA
CTATCTGCCCTGATTCACCCTCTTCCTTGCTCTTCACATGTTTGGTCTTCAAATTAATTTCTTTGACTATAACAGTGCTGTTGTGCTTGACAAT
CTTTGTTATCTCACCAATTTTACCCTTATCACGCCCTGCAATCACTTTTACTGTGTCACCAAGCTTCACATGCATCTTGTGTACTATCGGAAGA
CTGTTTGGCTTGCATTTAATCCGCTCCCACCTTTTTAACTTTGCTTGGATAGGAGGGCATGGTGTCTTTGTAGACTTGATCAATGGTGTTGGTG
AAGAAGAAGAAGAA
GATGGAGACAAGCGTTGACCAAGAAATGACTTGTTGGACAAAGAAAGAGCTGTGAATGAGCTCTGAAGAGAAACCATTGC
TGCCATTGTTGTTCTTCTTGTTTTATGAAAACCTTTGTTTTTTGGTTTGTGTCACTCACAGGGGTTGGTTTTTTTATTGATTGAATGGAT

Primers for UN46269 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TTTACCCTTATCACGCCCTG 59.95320AATGGCAGCAATGGTTTCTC 60.08120271 489759
2TTTACCCTTATCACGCCCTG 59.95320GAACAACAATGGCAGCAATG 60.11920278 489766
3TTTACCCTTATCACGCCCTG 59.95320GGCAGCAATGGTTTCTCTTC 59.8220268 489756