Simple sequence repeat (SSR)
>UN45668 GGCACGAATGCTTAAGATCAATCACAGCTTACTCGCTGACGGTACTCATATAGTATAAGTACAGAGATATAATGTGCCAAGGCACCCATGACCA CAAAGATATGAAATATTTGATGACTATGCCCAACTAAATCAAACCAACCTGGCTTCCACTTCTCAGGTACTCGGCTAACATAAAACATAGCCCC AACCAAGTAAGAAAACCCCATAGCGGCTTCAAACCCTAAAGTCGGATTCCTCTGAGGCACATTCCAATTCATAATTGTAGCATGGATTGCAGGG ATAACACCAAAAAGACCCATTGCCACAAAAATCAAAGTACGCATGAAACGATATTTTCCTCTCGTTCGTGTTGGAGAAAGCAGCACAATGACTG CAAAAACGCCCAGAATGGTGATTACGCCAAGGTAGACATATTGCCACACGGGGTTGCACTGGAAGAGATAATAGATTGGAGGGAAGAATGAGGT GATGATCATGACTGCGATTCCGGTATAGTCTAATTGACTGAGTAGACAATTTAGATTATGCGAGTGACAAGAGAAGAGGTGGCATAGGCTACTT GCTATGAAACAGAACATTGCACCAGCTAAGTAGACAAACAATGGCCATCGTGTTACTTGTATTTGAGGTGGTGCAGTATCCATGTATGACGACG ATATCAACTGATGAGTTGTACTTGAAGAATGATCTGAAGGGAAAACCCATTTGGAAACATGAAGGAAGTCTGCCACCGGATACAATTGGGTCAG GTTTGCAATTGTCAGCACTAAGAATGCAAGAAATCCGATCACGTGAGTCCAAACATTGAGTGTTTCATTATGACAAAGAAAGAGTGAAATGAAA GCATGTTTGAGAGACCATTCGCTTCTGTAGTAATTCAATATATACTCATTATCTTTCATATAATCTGGCAATTCTTCATATTTCAACAACTGAT ACTTCTTGTTGTTTTTCTTCTTCTTCATGTTTTCGTTGTTGTTGTTGTTTGAGTTTAGAAACTGTGTTTCATCCATCGTACTTGGTGCTACATG TAGAGCGTGTGACCGGTGAGATAGATTAGA |
Primers for UN45668 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CGATCACGTGAGTCCAAACA | 60.722 | 20 | TCTATCTCACCGGTCACACG | 59.701 | 20 | 272 | 788 | 1059 |
2 | TGAGAGACCATTCGCTTCTG | 59.112 | 20 | TCTATCTCACCGGTCACACG | 59.701 | 20 | 206 | 854 | 1059 |
3 | CGATCACGTGAGTCCAAACA | 60.722 | 20 | GCACCAAGTACGATGGATGA | 59.527 | 20 | 241 | 788 | 1028 |