Simple sequence repeat (SSR)
>UN45409 GTTAAAATGAAAAATGTCAAACCAAAGTGGAAGATAGTTTACCATTGAATACAAAGTTTACGAGCTCCTATTAGAGTCATCCATATTCATCCCT TTAAGACTTCTTGCTAACCAGATAGCAGTCTCTCTCGGGGATACCTTATCCCTGCCAAAAGGTCTAAGAACAACCGCCAGTTCTTGCAGCCTAT TTTGTTGAAGCAAATCTGCAGATAATTCAAGAAGCTCTTCAAGTGCTTCAGCCCTCTGCCTCGTAGATGTTATATCTAAAATTTCCTTCACCGG TGGCGTTTCTTGTTGAATTTCTGGTGACTTTGGCTTTATTTCCGGAATCTTTGCATCAATATCTTTACCGCAGGGACTATCATAACGCTCTGGC TTCACAGCCGTTCTTTCAGATTGATCTGACGGTTCTAAAGACCCTGTTGGAAAGGCGAAGGTTTTGGTCTCGGGATCATCTTTTACCATATTCA TTAGGTTCCCAACCTCTAAATTCCTTTCAACATTTTCCTCATTTCTAGCTGTGAAACTACTTTGATGTGTGACATGAACCACATCACTAAAAGC TGGTGGCGGCTGCTGATGGGGAGGCGCAAGTTTTTCAATTGTTGGATTTTGTATATTCGATACCCCATCTAACATCAAATTATTATTCATTTGA CTAGACAAAACAGGAGCAATGGAAGATGTAGTAGTAGTAGTATCTTCTACATGGGTGATAATCTCTTTTTCAGTGAATTTATCATCACCTGTGG ACATGGATACGGAATCAGTGTTTGATTGAGAAACTGTGTCAGACCCACTTGGAGATAACACATCCAAGGCTGAATTTGAGCATGAAATCTCATT AGCAAACCCAGAATTTTGAGTTTTAC |
Primers for UN45409 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATCACTAAAAGCTGGTGGCG | 60.27 | 20 | TGATTCCGTATCCATGTCCA | 59.732 | 20 | 217 | 553 | 769 |
2 | ATCACTAAAAGCTGGTGGCG | 60.27 | 20 | TTCCGTATCCATGTCCACAG | 59.369 | 20 | 214 | 553 | 766 |
3 | ATCACTAAAAGCTGGTGGCG | 60.27 | 20 | CCGTATCCATGTCCACAGGT | 60.656 | 20 | 212 | 553 | 764 |