Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN43311
AGTGACTTTTTGCATGACTTTTTTAAAACCAACGGATTCACACCTAATTTATTCAGCCTCTTGCATGTGAGAAGAACAGAGATGAAATCAGACG
GAGACGATGACGTGGAGCTAAGCTTACAAAGAACAATCAAAACGATGTCGTCAGGCAACGTATCAAACAGATCTGTGTTTGTTGTTGTTGTTGC
ATGGTCATAAACAGGTCCGTTATTGCCTCTAAGCTTCTTCCTCATGGTCATTGTTTTAGATGTGTTTGTTTGAACAAGTGAGTTTAATTTATAC
AATATGAAACGGTTGTTGATTCATTCGTTTATTGCTTTGTATGTATGTG

Primers for UN43311 SSR

Primer pair	Forward primer (5'-3')			Reverse primer (5'-3')			Product
Primer pair	Sequence	Temperature	Size	Sequence	Temperature	Size	Size	Start	End
1	TCGTCAGGCAACGTATCAAA	60.257	20	AAACGAATGAATCAACAACCG	59.853	21	171	142	312
2	AAAACCAACGGATTCACACC	59.694	20	GCTTAGAGGCAATAACGGACC	60.109	21	198	25	222
3	GTCGTCAGGCAACGTATCAA	59.722	20	AAACGAATGAATCAACAACCG	59.853	21	172	141	312