Simple sequence repeat (SSR)
>UN41741 CTTGTATTCTCGTTTGCTGCTTTCTCCTTCTCTTCTTTCTTCTTCTTCTTCTCCATCCGTTGTTCATTTTGAATTTTGATTTTCCATAACATGT GCTTCCTCTCCCTGAGTTGCAATTCCTTTACTCTCTGTAGGTTGTTAATAAGTTGATCAATGTCTTGATGTGTTTTGTTTTTTTCCTTCATTCT TTTCAATGCTTCATCTAAACTTTCCTTAAAATGTTCCCAATGCATATCCTCCAAAGCCCAAAGCTTCTCCAGAAGTTCCACTGTCATCTTCTTT TTAAAATAATGCCCCTTTTTTTGCATTTCTGCCCAATGCCATTCAAACCCTGAAATCACTTCTATTTGTCTATTCAACAGCTTATTGAACGTCT CATTATCAAACATCATTTTTTCTTGGTTTTCAGTTTGGTAATTGTTTGCTCAAAAAAAAAAGTTTGGTAATTGAGAAGTATCTGATTATATTAG GGTAATTGGGTTTGGGGGTTTTCAATTCGGGGTAATTTGGGTTTGGGGTTTGAGCAATGCTAGACCACTTACAAATTCTAGACAAAAAATTTA |
Primers for UN41741 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCGTTTGCTGCTTTCTCCTT | 60.132 | 20 | TTTGGGCTTTGGAGGATATG | 59.894 | 20 | 241 | 10 | 250 |
2 | CGTTTGCTGCTTTCTCCTTC | 60.132 | 20 | TTTGGGCTTTGGAGGATATG | 59.894 | 20 | 240 | 11 | 250 |
3 | TCGTTTGCTGCTTTCTCCTT | 60.132 | 20 | ATTGCAACTCAGGGAGAGGA | 59.803 | 20 | 108 | 10 | 117 |