Simple sequence repeat (SSR)
>UN01450 GCTAATAAGAGATTGTCGCCCTGGAAATCGAGCTGGCTTTTCTTCATCCTTTGCAATTTCATTGGTCTCTTCTTCTTCTTCTTCTTGTAGTCGA TTGTTTGTAATAAGTTTTTTGTTTGTAATAAGTTTTTCCCTTTTTTTGGCGATCCTCTCTCGTCTTTTCTTCCTTTCAGCACCAGCACCAACAA CAGCAGCATAAGAAGCAGTAGGTTTGGTTTGTTCTAGTTGTAGTTCAATTATAGGTTGTTTAATTCTAGGCAAGCGAGCTCCTTTAGAAGTCCC AAGAAGGCGAAAATCGAGCTTGCTCCATGCTCCAGACTTGTCATTATAGTCCCATCCAAATTTTTTTCCAATCTCCTCCAGCTGTTGTGCCACA CCATACCCCGAAGAAGAACCCGAAAGAGGTTGATCACCAGTGAGGAGCTTCTCAGCAAGCTCCCATTGGATCCTGTCAGCGTAAACCTCGTCCT CCAAGACATCCTTGGCAAGCTGACCCCATTTGTCGAAATCACCCTTTGTGTTCATTAAAGGGTTAGTTGACATCCATTTGAGATAGTCAGAAGG CAGCATGCCTAACATTTTTCCTTTGTGTTTTCCAAAGTCTATGACAATGTCACGTGGGTGAATCTTTTTAATCTCCACCTTGTCCTTGTTACTT TTTATCTTATTGTTGTTATTCAAGCAGCATGAAACTACTTCTCTCAACCTTAAAGAGGTACA |
Primers for UN01450 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CGAGCTGGCTTTTCTTCATC | 60.096 | 20 | TCGCCTTCTTGGGACTTCTA | 59.948 | 20 | 264 | 29 | 292 |
2 | ATCGAGCTGGCTTTTCTTCA | 60.096 | 20 | TCGCCTTCTTGGGACTTCTA | 59.948 | 20 | 266 | 27 | 292 |
3 | TCGAGCTGGCTTTTCTTCAT | 60.096 | 20 | TCGCCTTCTTGGGACTTCTA | 59.948 | 20 | 265 | 28 | 292 |